Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01066 ATGAAGAATTGTGATGAATGGAAGCCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTGTCAGTTTCTACTATATTTTTGGCCCCCATCGGCTACTTTAAGGAAAGAAATGGAAGACCGCGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGAGCATCCGTCACCCAATACTTCTTCCTTCTGGGGATCCAATACACCTCAGCTACCTTTGCTTGTGCCTTTGTCAACATGGTACCGGTGATCACATTCATTATGGCATTGCCATTTGGATTAGAAACTTTGAACATTAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGTACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTATTTGATGACTCTCACTATCAATCTGCAGTTCCTCCAGTGGCCATGAGATCTGCAATGGACCAAGCTTCTAGTACTGCTAGAACAACAACACAGAAATGGTCCATTGGTGTAGTAGCTTTGATTATGGGAACCCTCTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGCAAGAGATACCCATGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAGCAACTTGTCCTCGTGGATTCTCAAGGATAACATACAAATAATCACCGTTCTTTATTCTGGGATAGTTGGGTCAAGTGTATGCTATGTGGGCATGTCATGGTGCGTAAAGAAGAGGGGTCCGGTCTTCACTGCAGCATTCAGCCCTCTTGTTCAAATAATGTCCGGCATGATTGATATCCCCTTCTTGCACGAGCAGCTTCATCTTGGAAGTGTGGTGGGATCCATGTTGGTGATGGTCGGGTTGTACATTCTTCTATGGGGCAAAAGCAAAGATATGATGCAGAATGGCGCTACTAATAATAAGTTGGCCCAAGAAGTTGAGGAAACCAAGGAACAAGAGCCGCAAGTATAA 1089 0.4242 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVSTIFLAPIGYFKERNGRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCKGGKAKILGTFVCIGGALLLTLYKGKPLFDDSHYQSAVPPVAMRSAMDQASSTARTTTQKWSIGVVALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSNLSSWILKDNIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGSVVGSMLVMVGLYILLWGKSKDMMQNGATNNKLAQEVEETKEQEPQV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01066 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Pumo6g01066 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Pumo6g01066 362 PANTHER WAT1-RELATED PROTEIN 8 342 IPR030184 GO:0016020|GO:0022857
Pumo6g01066 362 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020
Pumo6g01066 362 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01066 Pumo-Chr6 14101455 14107107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01066 5 338 Nodulin-like Gene Family AT1G11460 38.209 8.36e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01066 - - gmx:100791663 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01066 6 14101455 14107107 Pumo2g00671 2 10686843 10690850 PCT