Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01057 ATGCCAGGGAACAATTATAGCTGCCTCCCTTTAACACCAAGGTCTAGATTGGAAAGACTTCTGAGGGAGAGAGAGCTAAGGAAATCCTTCAAGCATATTCAACCAACTGAGGAAGCAAGAGATGGCAACAAAGAGGGAGAACAATTTTATGGTGATTCATGCATAAGTGATAATGAAATTTCGGGTGTTCATAAAGAGGAAGAGGTCACGGAAACGAATGAGGATGCAAGAGTTTTTGCAGATAGAAGCCAAAGGCAAGATGAGAGGCCAAGCAAACAACGTTTGTTGGTGGTCGCTAACAGGTTGCCTGTGTCTGCTGTTAGGGAGGGTGTGGAGTCATTTCGTCTTCATATCAGTGTAGGCGGGCTAGTCAGTGCACTTCTAGGCAAGAAAAAGTTTGTCACCTTGCATTAA 414 0.442 MPGNNYSCLPLTPRSRLERLLRERELRKSFKHIQPTEEARDGNKEGEQFYGDSCISDNEISGVHKEEEVTETNEDARVFADRSQRQDERPSKQRLLVVANRLPVSAVREGVESFRLHISVGGLVSALLGKKKFVTLH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01057 137 Gene3D Glycogen Phosphorylase B; 79 136 - -
Pumo6g01057 137 MobiDBLite consensus disorder prediction 61 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01057 Pumo-Chr6 13897770 13898183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01057 1 133 Trehalose Biosynthesis Gene Families AT1G78580 47.857 1.97e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01057 K16055 - gmx:100816642 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01057 6 13897770 13898183 Pumo6g01057 6 13897770 13898183 ECH