Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00992 ATGGGTTCCCGTTTGAGCAAGGCACGTGGTTCTCTCAAAAATGAAACGGAGGGAACATCATCAGGAAAAAATGAAGTTTCAAACAAGGAGCTGTCATGTTTGATGAGGATAAGGGATTTCATCAGCCTCTTGTTGACTTATCCAATGAAAATAGACGAGGAAGGTATATTAAAATCCTGGCTTAGTGCATTTCCTGAATGGAAAGCTCAGTTATTGTCCAATGATCATTATACTGTGATAGACAAACCATGGCGTGTACTTACTCAGAAGGCATTGAGCTGTATGAAAGGATTTATGCCCATGGAAATAATCAATCAAATAGAACATGGTGAGAGATCCATCTTAAACCATATTGATGAAACACCAGAATCCATTCTCCACTTAACTGTTGATCTTGCAGTTGAGCAACTAATTCAAACTTTGTTTTCTGGAGATTATTATGCACGCTATATCAGTCTGTCAACCAGAAACTTTGTTGAAAAAGGATCTGTAGTGAACAAAATAGAAGCAGCCTTGGAAGAGAAGCACAACATGTTTGGAATTGACAAAGATTTTCTTAGAGCCCTGTGGATCGATGCCTCAACATATGGGAGTGATGCAGAGGTTCGGGTTCAAGAAGAGATCAATATGAAGATGGGAGGATTTTTTGTGGCAGAAGAGAATGACATGTTGCGCACACAACGCATTGAGGAAAAGATGGGAAGCAATAAGCATTTAGTGATTGTAGTGGATGCAGACAGAAACAAGAAGCTGGACCTCCACAAAGTGTGTTTTCCGACTGTAATTGTGGTGGTGTTGATAACAACTGAACCGTCAACACAGGCAGAGAAGGATGATGACTTCAGAATTACACGCATGATGGATTTGAAAATTAGGACCCAAGATCATCTTTTGTCTTGGGAAGCCTTCTGCAGCTATTTGGACCGTAGCAAGGAACTGGTACGTTCATCAATGGCCATTCAGAGAATTGCAGTGCAAATTGTTAAGGAATGTCATGGCCATCTTCTTGCCATTGTCCTTGTGGCAAAGTACCTGAAGAATGTGGAAGATGTTAAACAGTGGGAAGTTGCACTTGACAAATTAAGCAGCCCAAATCCTTCCTATGATTATCAAGATAGTGACCAAATTGGCATTAGTAGGGTCATGGTCAATGCATTCGTAAATATTATTTGGGAAGACATTGATGATACACAAAAGCTTTACCTTGAACTCTGTTTATTTGTTCGCAACATTAAAATTGGGGTGGGAGTTGCAATCCTAGTGTTTGATAGGGCTGATTTATTAGGATATACACAAGAAATGATACCGAATTTAGATGAATTTGATGAATACAGAAGGCAAATCAGAGAGCTTCTAGACTGTTTTGTCTTGTTGAAAAATGAAAGGGGAGATGTCTATTTGCCCGTAGAAACCTATGATATGATAAAATCATTACACACCTTGAATCCTTCCATCATAAGGCATGGTGCATTAGGATTGACGGAGCCACCCTGCATTGGACGATGGCATGACCTTATTCAGATAGAATTGATGAACAATAAAATACGTGAGCTACCACAGTCACCAGATTGCCCTCAACTCAAAGTGTTGTTGTTGCAGGGCAATGTTGATTTGATGGATATCCCTGACTCATTTTTCAACTACATGCCTCTGCTTCAACACTTGGACTTATCCTACACTAGTATAAGGGATTTGCCCTCTTCTGTCTCCGAATTAATACAACTTACGAAATTTTTTCTTAGAGGTTGTGATCTCTTCATGGAACTACCACCGCAAATTGGACTACTAAAGAATCTTGAAGAGCTTGATCTTGATGGGACTTTGATAACTCATCTACTTATAGAGATCGGAGAACTGATCAACTTGCGAAGCTTAACCCTTTGCTTTGAAGGATACCATCATGTACTTAGTCATGGCAAAAAAGGCAAGCAAATTTCCAACTCAACAATTATTCCTCCAGGAGTGATATCAAATCTTACTCAGTTGAATTATTTAAACATCAAAGTTGACCCTGAAGATGAGCGATGGAATGAGAATGTTAATAGTGTTTTTGTGGAAATTATTGGATTAAAGAGGTTGGAGACAGTGAGTATATATGTCCCAAAGGCTAACCTTTTGAAATTCATACCAGTCCACAAATCCCTCAATTTCAGATTGGTTGTTGGTCATCATATGCGACGTTTCATATCGCGTGTAACACCTGAAGTGGAGCAAAAATTCAAACGTTGTGACTATAGTATAAAGTTTGTTAATGGTGTAAATGTTCCAAATGTAGTGAAAATGAATCTTGGAAACTTCAAGGCCTTGTACCTAGACCGACATATGACCATCAAGAGTCTCTCTGATTTTGAGTTGAGGAATTTATCTGGGTTGCATGTATGTATATTGGCGGAATGTAATGAAATGGAAACAATTGTCGATAGAGGTTATTTACATAATGGGCCTGCTCTTCCAAATTTGGAGTTTTTGAGCGTATTCTACATGAAAAATTTAAGAAGCATTTGTGAAAGGCCTAACCCCTCCTTTCTCCACTTGAAGTCTATAGCATTGCACACTTGCCCCAAGTTAACTACCTTCTTCACCTTAGACTCTCTTAACAACCTTTCCTTTTTGGAGGAGATTATTGTTGAAGATTGTCCAAAAGTAACCACCCTTATAAGTCATGACTCACCAGAACAAAACAAATCAGTGTTTTTCCTCCCCAAGTTGAGAATGATATCGCTTCTCTATCTTCCTGAATTGGTCAACATTTTTAATGGCCTGGATGTTGGACATGTTTTAGAAGAAATGGTTTTTTATTATTGCCCAAAACTCCAAAGTCTTTCCAAATCGGAGTTGTCAAGCAAATATTTGAGGATCATCAAAGGAGAAAGCACGTGGTGGGAAGCATTGAAATGGAATGTTGCAGAGTGGGGAGATGCTGGTCGACCCAATTTTCTTGAACTAATTTTTTTCCCAATTAATGAAGAGGCTGACATGATGACCCAACTAGCTGCACATCAAGAGATAGAACTAAATGCAGATCACAATGAGTATCCGGGAACCAAACACAGGCGTGATGATAGTAAGTTACCATCGAATCCTGAAGAAGTAAAAGACCTAGGCCGTGACTCAGCTGCAAATCCATTGATTGCATTCGCTTATAATGAGCTAAAGGTAATCACTGCAAATTTTAGGCCAGATCGTGTGTTGGGGGGAGGAGGATTTGGAAATGTTTTTAGAGGGTTCATTCCTGAGGAGTTAAGGCAGGGGCTTCCAACCCTTGCTGTAGCTGTTAATGTTCATGATGTTGACCACAGAGGGCGCAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGAAGCTTTCACATCCAAATCTAGTCAAATTAATTGGATATTGCTGCGAAGTCAAACATAGGGTACTAGTATATGAGTACATGCCTCGTGGAAGTTTGGAACACAATTTGTTCTCAAAAACTCCCATGCCATCATTGACATGGTCCATAAGAATGAAGATTGCATTTGGCTCTGCAAATGGACTTGCATATCTTCATGAAGCAGAGAAACCTGTCATCTATAGAGAATTTCGGCCATCAAAAATTTTATTGGACCAGGACTACAATGCAAAACTTTCTGACTTTGGCCTCGCTAAAGATGGACCAATTGGAGACCAATCCCATGTTTCTACTCGAATAATGGGAACATATTGTTATGCTGCACCTGAATACATGGCAGCGGGTCATCTGACGACTAAAAGTAATGTTTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTCACTGGAAGAAGATCTTTAGACAAGTCAAGACCTGCTGAAGAGCAGAACCTTGCAGAATGGGCTCTTCCTTTGCTGAAGGAAAAGAGGAAAGTTCTATCCATCATAGATCCAAGGCTGGATTGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAACCGTGACCCAAAAGCAAGGCCTCGAATGCAAGATATTTTACATTCATTGGAGCCTTTGCAGGCACACACAGAGGCCCCTATTGGAAAAAAACATTGA 4053 0.3977 MGSRLSKARGSLKNETEGTSSGKNEVSNKELSCLMRIRDFISLLLTYPMKIDEEGILKSWLSAFPEWKAQLLSNDHYTVIDKPWRVLTQKALSCMKGFMPMEIINQIEHGERSILNHIDETPESILHLTVDLAVEQLIQTLFSGDYYARYISLSTRNFVEKGSVVNKIEAALEEKHNMFGIDKDFLRALWIDASTYGSDAEVRVQEEINMKMGGFFVAEENDMLRTQRIEEKMGSNKHLVIVVDADRNKKLDLHKVCFPTVIVVVLITTEPSTQAEKDDDFRITRMMDLKIRTQDHLLSWEAFCSYLDRSKELVRSSMAIQRIAVQIVKECHGHLLAIVLVAKYLKNVEDVKQWEVALDKLSSPNPSYDYQDSDQIGISRVMVNAFVNIIWEDIDDTQKLYLELCLFVRNIKIGVGVAILVFDRADLLGYTQEMIPNLDEFDEYRRQIRELLDCFVLLKNERGDVYLPVETYDMIKSLHTLNPSIIRHGALGLTEPPCIGRWHDLIQIELMNNKIRELPQSPDCPQLKVLLLQGNVDLMDIPDSFFNYMPLLQHLDLSYTSIRDLPSSVSELIQLTKFFLRGCDLFMELPPQIGLLKNLEELDLDGTLITHLLIEIGELINLRSLTLCFEGYHHVLSHGKKGKQISNSTIIPPGVISNLTQLNYLNIKVDPEDERWNENVNSVFVEIIGLKRLETVSIYVPKANLLKFIPVHKSLNFRLVVGHHMRRFISRVTPEVEQKFKRCDYSIKFVNGVNVPNVVKMNLGNFKALYLDRHMTIKSLSDFELRNLSGLHVCILAECNEMETIVDRGYLHNGPALPNLEFLSVFYMKNLRSICERPNPSFLHLKSIALHTCPKLTTFFTLDSLNNLSFLEEIIVEDCPKVTTLISHDSPEQNKSVFFLPKLRMISLLYLPELVNIFNGLDVGHVLEEMVFYYCPKLQSLSKSELSSKYLRIIKGESTWWEALKWNVAEWGDAGRPNFLELIFFPINEEADMMTQLAAHQEIELNADHNEYPGTKHRRDDSKLPSNPEEVKDLGRDSAANPLIAFAYNELKVITANFRPDRVLGGGGFGNVFRGFIPEELRQGLPTLAVAVNVHDVDHRGRREWLAEVIFLGKLSHPNLVKLIGYCCEVKHRVLVYEYMPRGSLEHNLFSKTPMPSLTWSIRMKIAFGSANGLAYLHEAEKPVIYREFRPSKILLDQDYNAKLSDFGLAKDGPIGDQSHVSTRIMGTYCYAAPEYMAAGHLTTKSNVYSFGVVLLELLTGRRSLDKSRPAEEQNLAEWALPLLKEKRKVLSIIDPRLDCDYPIKAVHKAAMLAYHCLNRDPKARPRMQDILHSLEPLQAHTEAPIGKKH 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00992 1350 PANTHER OS01G0588500 PROTEIN-RELATED 1022 1339 - -
Pumo6g00992 1350 MobiDBLite consensus disorder prediction 1010 1034 - -
Pumo6g00992 1350 Pfam NB-ARC domain 134 365 IPR002182 GO:0043531
Pumo6g00992 1350 Gene3D - 296 374 IPR042197 -
Pumo6g00992 1350 Gene3D Transferase(Phosphotransferase) domain 1 1140 1348 - -
Pumo6g00992 1350 Gene3D Ribonuclease Inhibitor 761 956 IPR032675 -
Pumo6g00992 1350 SUPERFAMILY L domain-like 491 942 - -
Pumo6g00992 1350 Gene3D Phosphorylase Kinase; domain 1 1022 1139 - -
Pumo6g00992 1350 ProSiteProfiles Protein kinase domain profile. 1058 1339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00992 1350 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1140 1345 - -
Pumo6g00992 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 401 IPR027417 -
Pumo6g00992 1350 SUPERFAMILY Protein kinase-like (PK-like) 1042 1333 IPR011009 -
Pumo6g00992 1350 Pfam Protein tyrosine and serine/threonine kinase 1061 1335 IPR001245 GO:0004672|GO:0006468
Pumo6g00992 1350 Pfam Leucine rich repeat 525 585 IPR001611 GO:0005515
Pumo6g00992 1350 Gene3D Ribonuclease Inhibitor 462 688 IPR032675 -
Pumo6g00992 1350 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g00992 1350 SMART LRR_typ_2 549 572 IPR003591 -
Pumo6g00992 1350 SMART LRR_typ_2 596 619 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00992 Pumo-Chr6 12486277 12499866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00992 1019 1350 Glycoside Hydrolase AT3G07070 45.665 1.21e-87 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo6g00992 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00992 - - gmx:102668266 2060.42