Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00972 ATGGAGGTGACCAACCTTGTAGTCTTGCCAGCAGTTTCAGCATTCTTTGTCCTTTCTATACATTTCATCACTAAAGTTCTCAGACTCAGGAAACATCCAAACCTTAATCTTCCTCCTGGAAGATTAGGATGGCCTGTTGTTGGAGAAACCTTAGAGTTTATGCGTACAATGAATGAGGGCAACGTGATAAGGTTCATACAAGAGAGAGAGGAGAAATATGACTCCAGGGTGTTCAAGACTTCAATGTTCGGAGATCCTGTTGTTGTGTTTTGTGGACCAGCTGGGAACAAGTGCCTATTTAGCAATGAGAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCGGTAAGGAAGCTGTTAAGGTTGTCCTTGGTTAATAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAACTACTTGCCAAAGATGGATAGCATTGCTCAGCGCCATATAGACACATATTGGGAAGGAAGGGAGCAGGTGTTTGTCTATCCCATAGTACAGTTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGATTCTGACCATATATCAAAGCTTTCGATAAAATTTGATGAATTTCTGAAAGGGATCATTGGCTTTCCCATCAACATTCCTGGAACAAGGTTCCATCGGGCAATGAAAGCTGCAGATGTAATAAGGAAAGAAATTAAAATTATTCTAAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGCATCACCCACACAAGACCTTCTATCACACATGCTTGTTACATCTGACCCCAATGGAAGGTTTATGACTGAAATGGAGATTATTGATAACATACTTCTTCTACTTTTTGCCGGCCACGATACTTCTAGATCAGTGTTATCATTAGTCATGAGGTATCTTGGACAGTTGCCTCAAGTTTATGAACATGTCTTGAAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGCAGGGCAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTCCCCACCTGTGAGTGGTGCTTACAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATGACATCCCTAAAGGGTGGAAGCTGCATTGGAACACTGGTTCATCTCACAAGGATCCAACACTCTTCTCGAATCCCGAAAATTTTGACGCTTCAAGGTTTGAAGGGGCAGGACCTACACCCTTTTCATATGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCAAGAGTTTGCAAGACTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGATTTGGTGATTCCTGATGAGAAGTTTAAGTATGATCCCATGCTAGAACCAGTAGAAGGACTTGCAATTCGACTTCATCCTTCCCATTTCTAG 1446 0.4163 MEVTNLVVLPAVSAFFVLSIHFITKVLRLRKHPNLNLPPGRLGWPVVGETLEFMRTMNEGNVIRFIQEREEKYDSRVFKTSMFGDPVVVFCGPAGNKCLFSNENKNVQVWWPSSVRKLLRLSLVNKVGDEAKMVRRLLMSFLNAETLRNYLPKMDSIAQRHIDTYWEGREQVFVYPIVQLYTFELACCLFLSIEDSDHISKLSIKFDEFLKGIIGFPINIPGTRFHRAMKAADVIRKEIKIILKKRKVDLEEKRASPTQDLLSHMLVTSDPNGRFMTEMEIIDNILLLLFAGHDTSRSVLSLVMRYLGQLPQVYEHVLKEQLEISQGKEAGQLLQWEDVQKMKYSWNVASEVMRLSPPVSGAYREAIKDFTYADYDIPKGWKLHWNTGSSHKDPTLFSNPENFDASRFEGAGPTPFSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPVEGLAIRLHPSHF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00972 481 Gene3D Cytochrome P450 28 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 FunFam Taxadiene 5-alpha hydroxylase 28 479 - -
Pumo6g00972 481 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 CDD CYP90-like 69 478 - -
Pumo6g00972 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00972 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Pumo6g00972 481 PANTHER CYTOCHROME P450 26 33 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00972 Pumo-Chr6 12160793 12164981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00972 36 383 Cytochrome P450 AT5G36110 44.444 6.40e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00972 - - gmx:100778750 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00972 6 12160793 12164981 Pumo6g00972 6 12160793 12164981 ECH