Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00962 ATGTTGTATTGGCAAGACAGGCACCCTTACAATGTATCATGGTTAATCATCTTGATTCAAGGGGTTTACCCCAAGAAAAAAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTGCGACATCCCAATGTGGTCCAGTTTGTTGGAGCTGTAACTCAAAATATACCTATGGTGATTGTGTGTGAGTACCATGCTAAGGGTGACCTGGCAAGCTATCTTCAAAAGAAAGGGCTTGTGCTGACATTTATGGTGTGCTATGAAATGGCTGTCTTAACTGAGAAGATAGAATGTATCTCTAATCTTCCCACCTTTATTCACATTTACATTATAAGCCTTGTGCAGACAAGATATACAGGCTTGTACGTGGCACCGGAGATTTACAGAGATAAAGTATTTGATAGAAGTGTGGATGCATATTCTTTTGGACTCATTATATATAAGGGTACACAGGCCTTCCATCTCAAGTCCTCGGAGGAGGCAGTGAAAATGATGTGCTTAGAAGGGAAAATACCAGCATTCAAGATCAAAACAAAACATTATCCTCCGGAGTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAACACCTGTTGTCAGGCCAACATTTTCTCAGTTTCTTTGGAGGAATTCAAAGCGGTGA 642 0.4034 MLYWQDRHPYNVSWLIILIQGVYPKKKNAFKHELTLLERVRHPNVVQFVGAVTQNIPMVIVCEYHAKGDLASYLQKKGLVLTFMVCYEMAVLTEKIECISNLPTFIHIYIISLVQTRYTGLYVAPEIYRDKVFDRSVDAYSFGLIIYKGTQAFHLKSSEEAVKMMCLEGKIPAFKIKTKHYPPELKELIEECWDPTPVVRPTFSQFLWRNSKR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00962 213 SUPERFAMILY Protein kinase-like (PK-like) 23 208 IPR011009 -
Pumo6g00962 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00962 213 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 207 - -
Pumo6g00962 213 Gene3D Transferase(Phosphotransferase) domain 1 19 109 - -
Pumo6g00962 213 FunFam serine/threonine-protein kinase STY46-like 18 66 - -
Pumo6g00962 213 Pfam Protein tyrosine and serine/threonine kinase 120 206 IPR001245 GO:0004672|GO:0006468
Pumo6g00962 213 Pfam Protein tyrosine and serine/threonine kinase 24 89 IPR001245 GO:0004672|GO:0006468
Pumo6g00962 213 Gene3D Transferase(Phosphotransferase) domain 1 110 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00962 Pumo-Chr6 11982546 11993895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00962 28 212 MAP Kinase Kinase Kinase AT2G31800 47.768 2.54e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pumo6g00962 PK_Tyr_Ser-Thr 4.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00962 - - gmx:100784109 237.269