Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00961 ATGCGCAATTCGAGAATGCAGAGGGTTTTGGAAATGAGGGTGAAGAACGAGAGTAGCAGCAATGCCAAGGCGATAGCAGACCCTACAACGATTGCAACAATGGCACTAGTGGAGATATATGTAGATGGAGACGGCGCCGACACCGAAAAGAACGAGGTACACTGCCCATGGAGGGATATCAAAGAATATCCACAGGTTGATAACGCCTTTTGGATCATAGTTGGACACTTGCTGGGACTGGGAGAATCTCATTTCTTGCTTGTTTTCTTTCTCGTTTCAGTCCAATGTGTTATTGCTGCAAATAACAATTTGAAGCCCGGAGATACACTGAATACGACAAGCCAGCTATGCTCAGAAAACAACAAATACTGCATTAATTTTTACACAATAAATCCAAATCCTTCTCTTAACTACACTTACTTGGTCATCAAAGACGGAGAGGATGATAATTGGGTAGTGTGGGTTGGTAATAGAAATCAACCTGTTGACAAGGATTCTGCAGTTTTGATGCTAAGCCACTCTGGTGTACTCAAAATAGAATCCAAAGATGCGAAACCCATAATCCTTTACTCTTCACCTGATCAGCCAGCGAACAACACTGTGGCCACGCTGTTGGATACAGGCAACTTTGTGCTGCAACAACTTCACCCCAATGGAACAAACAGTGTGCTCTGGCAAAGCTTTGATTATCCTACTGATACTCTACTCCCTGGGATGAAGTTAGGAATCAATTACAAAACTGGTCATAATTGGTCACTGGTTTCGTGGTTGGGTGCTGCCAACCCAGCGCTCGGGGCATTTGGGCTCGAGTGGGAACCGAGAAGAAGAGAATTGATCATCAAGGAACGAGGACAACTGTGCTGGACTAGTGGAGAATTTACAAACAATGGATCATTGCACAACACACAGTACAAGATTGTCTCAAACGACGATGAGAGCTACTTCACAATTACAACTTCAAACGGACAAGAGCTTACAGCATGGGAGCTATTAGAAACTGGGCGGCTGATAAATCGGAATATAGAAGCTATTGCAAGGGTTGATCTGTGTTATGGGTACAACACAGATGGAGGGTGCCAAAAGTGGGAGGAGATACCCACATGCAGGCATCCTGGTGATGGTTTTGAACTCAAGGAAATTTTCGTCAGTATGAACATGAAAAACGATCTAGCTAATTCCAGTTATGGCCCAAGTGATTGCCGGGCTATTTGCTGGAAAAATTGCAGTTGTGATGGATTCAGAAATTACTATGATTATGGAACTGGTTGTACATTCTTGCATTGGAATTCAACGGAAGGTGATAATTTTGCAAGTGGGGGCGAAAAGTTTTACATGTTGGTGAAGAGCACCCATCATAAAGGTACAAAAAAGTGGATATGGATAACTATTGTAACAGTAGCTGTTTTATTTGTGACATGTGCTTTCGTTATATTTCTGGCCTTGAAGAAAAGAAAACATTTGTTTGAAGAGAAGAAAAGAAATGGAATGGAGTCTGAGATGCTAGATTCAGCAACTAAAGATCTTGAAGATGAGTTCAAGAAAAGACAAGATCTAAAAGTATTTAACTATACCTCAATTTTGTCAGCAACCAATAATTTTTCACCAGAAAATAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAATCCTACCAAGTGGGCAAGAAGCTGCTATAAAAAGACTTTCAAAAACATCTAGGCAAGGGATTGTGGAATTCAAAAATGAACTAATGCTCATATGTGAACTTCAGCACATGAATCTTGTACAACTACTTGGATGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCAAACAAAAGTTTGGATTTCTATTTATTCGATTGTACTAGAAGCAAGTTACTAGACTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAGGGATTACTCTATCTTCATAAGTACTCGAGGCTCAAAGTCATTCACAGAGACTTAAAAGCTAGTAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCTGATTTTGGATTGGCAAGAATGTTTGCAGAACCATAA 2061 0.4027 MRNSRMQRVLEMRVKNESSSNAKAIADPTTIATMALVEIYVDGDGADTEKNEVHCPWRDIKEYPQVDNAFWIIVGHLLGLGESHFLLVFFLVSVQCVIAANNNLKPGDTLNTTSQLCSENNKYCINFYTINPNPSLNYTYLVIKDGEDDNWVVWVGNRNQPVDKDSAVLMLSHSGVLKIESKDAKPIILYSSPDQPANNTVATLLDTGNFVLQQLHPNGTNSVLWQSFDYPTDTLLPGMKLGINYKTGHNWSLVSWLGAANPALGAFGLEWEPRRRELIIKERGQLCWTSGEFTNNGSLHNTQYKIVSNDDESYFTITTSNGQELTAWELLETGRLINRNIEAIARVDLCYGYNTDGGCQKWEEIPTCRHPGDGFELKEIFVSMNMKNDLANSSYGPSDCRAICWKNCSCDGFRNYYDYGTGCTFLHWNSTEGDNFASGGEKFYMLVKSTHHKGTKKWIWITIVTVAVLFVTCAFVIFLALKKRKHLFEEKKRNGMESEMLDSATKDLEDEFKKRQDLKVFNYTSILSATNNFSPENKLGQGGFGPVYKGILPSGQEAAIKRLSKTSRQGIVEFKNELMLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDCTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGLARMFAEP 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00961 686 Gene3D - 95 228 IPR036426 -
Pumo6g00961 686 ProSiteProfiles Bulb-type lectin domain profile. 101 225 IPR001480 -
Pumo6g00961 686 SUPERFAMILY Protein kinase-like (PK-like) 515 684 IPR011009 -
Pumo6g00961 686 Pfam D-mannose binding lectin 152 256 IPR001480 -
Pumo6g00961 686 ProSiteProfiles Protein kinase domain profile. 533 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00961 686 Gene3D Transferase(Phosphotransferase) domain 1 609 686 - -
Pumo6g00961 686 Pfam PAN-like domain 369 425 IPR003609 -
Pumo6g00961 686 SMART blect_4 107 231 IPR001480 -
Pumo6g00961 686 Gene3D Phosphorylase Kinase; domain 1 491 608 - -
Pumo6g00961 686 FunFam Os07g0541700 protein 609 686 - -
Pumo6g00961 686 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 498 608 - -
Pumo6g00961 686 SUPERFAMILY alpha-D-mannose-specific plant lectins 151 257 IPR036426 -
Pumo6g00961 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Pumo6g00961 686 Pfam Protein tyrosine and serine/threonine kinase 536 683 IPR001245 GO:0004672|GO:0006468
Pumo6g00961 686 SMART serkin_6 533 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00961 686 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 199 683 - -
Pumo6g00961 686 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 95 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00961 Pumo-Chr6 11909361 11914695 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00961 452 684 Receptor kinase-like Gene Family AT4G05200 49.356 4.93e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo6g00961 PK_Tyr_Ser-Thr 1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00961 - - gmx:100809767 1029.24