Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00960 ATGTCTCCTGAATATGCTATGGAAGGAATTTTCTCTATAAAGTCTGATGTCTATAGCTTTGGAGTGTTGATCCTTGAAATTATTAGTGGAAGAAGAAATACTAGCTTCAATGGCGACCACCCTATGAATTTGATAGGACATGCATGGGAGTTATGGAATCAAGGTACACCTCTACAATTAATGGATCCATCACTTAATGATTTGTTTGATCCCGATGAAGTGAAACGATGCATTCACATTGGTCTCTTATGCATAGAACAACATGCAAATGATCGACCCACAATGTCTCATATAATTTCAATGTTAACAAATGAAAGTGCAGTAGTTACCTTGCCTCGAAGACCAGCATTCTATGTGGAAAGAGAAAATTTTGAAGGAAAAAAATCTTCCAAAGAGTTATGTACAAACTCTACTGAAGAAATTACCACTTCTTCATTGTAA 441 0.3583 MSPEYAMEGIFSIKSDVYSFGVLILEIISGRRNTSFNGDHPMNLIGHAWELWNQGTPLQLMDPSLNDLFDPDEVKRCIHIGLLCIEQHANDRPTMSHIISMLTNESAVVTLPRRPAFYVERENFEGKKSSKELCTNSTEEITTSSL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00960 146 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Pumo6g00960 146 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 107 - -
Pumo6g00960 146 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Pumo6g00960 146 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
Pumo6g00960 146 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 144 - -
Pumo6g00960 146 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00960 Pumo-Chr6 11908704 11909224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00960 1 125 Receptor kinase-like Gene Family AT3G45860 53.125 1.82e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo6g00960 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00960 - - gmx:100809767 246.514