Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00953 ATGGCAAATTCAAAGGGCTCATCGGGTTTCAGAAATTTTATGTATCCTGGAAAGCATGCTCTACTTCCTCCTAAAAGTCCGTTTCCTAGTGTTTCCCAAGCATACGCTGATTATGTCCCAAATCCCGCTGTTGGTTTAAAGGCTGGTAACAGACCTAGAGAGGGAAACACACACCACCAACGTACTTCATCTGAGAGCCATGTTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAGAGGTGGCCATCGGCGTTCATCAAGTGATTCTTTTGCGTACATAGACACAGTTAATGCATCTAACATCAATTATGCTGATCAGGACGAGTATAAATATAAGAATATGATGTCTATTCCGTCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGTCATGTACCTGTTTATGCTGAAATGAACTCTGCAAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCAGTTGGTGTTCCCTCAGGCAAAGACAGTGCTGCTTTTCAGAGTTCAGGATTGCAATGTACACCACATGAAGCAGACGGTCTTCCATCCGCTGCAATTGAAAAGCACGATTCAGTAGAATCAGGCTTACAGGATGCAAAATCATTTCCTGAAAAAAAGGACAGTTCACATGCAAAGTCATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGGAAACTTCAATACATAGCTGAGCTGGAAAGGAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTCTCAGCCGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGACGATTACGTACATTGTATCAGCAGCAGCAACAGCCGCAGACGCAGCCACAACAGCAACCATCTGGTAGCCACAGACGCACGAACAGCAGAGACCTAGAATCTCAGTTCGCAAACCTTTCTCTAAAACACAAGGACACCACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1131 0.4394 MANSKGSSGFRNFMYPGKHALLPPKSPFPSVSQAYADYVPNPAVGLKAGNRPREGNTHHQRTSSESHVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNASNINYADQDEYKYKNMMSIPSWSSQDFDRSKDARHVPVYAEMNSAKQKNRSWDSFSNAMTNPVGVPSGKDSAAFQSSGLQCTPHEADGLPSAAIEKHDSVESGLQDAKSFPEKKDSSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEQEVLEREIGRLRTLYQQQQQPQTQPQQQPSGSHRRTNSRDLESQFANLSLKHKDTTNSGQDPALRI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00953 376 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
Pumo6g00953 376 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Pumo6g00953 376 Gene3D - 237 290 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 198 242 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 152 190 - -
Pumo6g00953 376 Coils Coil 248 303 - -
Pumo6g00953 376 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Pumo6g00953 376 MobiDBLite consensus disorder prediction 43 97 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 351 376 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 325 344 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 325 376 - -
Pumo6g00953 376 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Pumo6g00953 376 MobiDBLite consensus disorder prediction 147 244 - -
Pumo6g00953 376 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00953 Pumo-Chr6 11807712 11812839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00953 20 307 bZIP Transcription Factor Family AT2G42380 29.934 7.53e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00953 - - gmx:100813098 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00953 6 11807712 11812839 Pumo6g00953 6 11807712 11812839 ECH