Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00952 ATGGGTAAGGGCCCCTTCTCCTTCCGCCGCTCCGCCTCTCGCCGCCGACCCAAGAAGACCGCCGCACCGCCCCCGCCTCCCTCCCCGCCGCAGCCTCCCTACGCGGCCGGAATCCCCGCCTCGCTGGACGACAACAACCGGCTGATCGCCGCCGCCGGCAGCAGCGCGCTGACGAAGGCGAAGAAGAAAACCGGCGGTGCCAGGTTGTGGATGAGGTTTGACCGGTCCGGCCGGTCAGAACTCTTGGAGTGGGAGAAGAACGCCATCATCCGCCACGCCGCGATTCCCGCTAGAGACTTGAGAATCTTAGGCCCTGTTTTCTCCCACTCCTCCAACATTCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCAATTGTGACTGCTGAAGAAGTGTTATTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCTACAGCTTCCTGGTAAAAATCAACCTAAACTTCTCGGCGGCGCGGAGGAACAGGAAGGCGAAATGCAGGTCTCTAATGGCAGGCAATGGTTGCCTATGCCGGAGGTGGCCGATGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAGGTTCTGGAGATTGCTTTGGAGGCTGTGTGCACGTATCTGGACTCGAATGTGGCAGACCTTGAGCGAGGTGCTTACCCTGTGTTGGATGAATTGGCTAGGAATGTTAGCACCAAGAATCTTGAGCATGTGAGGAGTTTGAAGAGTAATCTTACGCGGTTGCTGGCACGAGTGCAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAATGAAGATATGGCACAACTATATTTGACAAGGAAGTGGTTGCAGAATCAACAATTTGAGGAGGCTCATTTGGGTGCCACAACCTCAAATAACCTTCCTAATACCTCACGTGCTGTTCGTCGACTTGGTTCTTACAGAAGTGAAAGTCTTGTGACCAGCCATTATGGGGATGATAACGATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTGGATGGAACTCGTAACAAGATATTATCTGTTAGGGAGTATATTGACGACACTGAAGACTATGTCAACATCCAACTTGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACGTTGACTATTGCGTCATTTGCTATTGCTATTGATACTTTGATTGCTGGTACATTTGGTATGAACATTCCATGTAAATTATATAAAACAGATGGAGTGTTTTGGCCCTTCGTTTGGATCACGTCTGCAGCTTGCGTATTGCTTTTCTTTCTTATTTTAGCATATGCAAGATGGAAGAAATTGCTGGGATCATAA 1350 0.4933 MGKGPFSFRRSASRRRPKKTAAPPPPPSPPQPPYAAGIPASLDDNNRLIAAAGSSALTKAKKKTGGARLWMRFDRSGRSELLEWEKNAIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRLQLPGKNQPKLLGGAEEQEGEMQVSNGRQWLPMPEVADGLQSELPFEFQVLEIALEAVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNLPNTSRAVRRLGSYRSESLVTSHYGDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIDTLIAGTFGMNIPCKLYKTDGVFWPFVWITSAACVLLFFLILAYARWKKLLGS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00952 449 CDD Mrs2_Mfm1p-like 70 446 IPR039204 -
Pumo6g00952 449 Gene3D Magnesium transport protein CorA, transmembrane region 387 446 - -
Pumo6g00952 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 33 447 IPR039204 -
Pumo6g00952 449 Pfam CorA-like Mg2+ transporter protein 330 442 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pumo6g00952 449 FunFam Magnesium transporter MRS2-1 58 141 - -
Pumo6g00952 449 MobiDBLite consensus disorder prediction 19 36 - -
Pumo6g00952 449 Gene3D Magnesium transport protein CorA, transmembrane region 171 380 - -
Pumo6g00952 449 Gene3D - 55 141 - -
Pumo6g00952 449 MobiDBLite consensus disorder prediction 1 39 - -
Pumo6g00952 449 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 385 437 IPR045863 -
Pumo6g00952 449 Coils Coil 246 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00952 Pumo-Chr6 11774443 11777902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00952 1 449 MRS2 Gene Family AT3G58970 66.004 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00952 K16075 - gmx:100812561 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00952 6 11774443 11777902 Pumo1g00410 1 5802320 5805143 PCT