Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00951 ATGGCCACCACCACACTAGCTCTCTCCAGAGCCATGGTGAGCACCTCCTTGATGAGGAGACAGCCTATGACTATGAGGCTAAAGGCATACCCCAAGGTGGGTGAGGCAGTACTTTTTGGTGTGAAACGTGGACGAGGTGGTCATTCATGGTTGTGTCACTTGTGGAAGGTTGAAATGGATTGTCATGGAGGTATTTCCAAAAGCTCTCCAAACAGGGAGCAAGAAGGCCTTAAGGAAACAGTTTTCTTACATGGTGACTTGGATCTGTTGATAATAGAAGCCAAGTCTCTTCCAAATTTAGATTTATCTAGTGAAGCAGTTAGAAAATGTATCACTATGGGCAGCATGTGCCATCCTCCATTTATAAAAGGACTAAAGACACACTCTGGAAAAGATAAGATGATAACCAGTGACCCTTATGTTTCTGTATGCATTGCTGGGGCTACCATAGCTCAGACTAGAGTGATTCCTAACTGTGAGAACCCTTTGTGGGATGAGCAATTTATTGTGCCTGTTGCTCACCCTGCTCAAAAACTGGAGTTCCTTGTGAAGGACAATGATATTCTTGGGGCTGAACTCATTGGAGTGGTGGAGATACCTGTTCACAAGATAATTTCAGGAAAAACTGTTAATGATTGGTTTCCCATCATTGGTCAGTATGGAAGCTGCTTAAAACCTTATCCTGAATTGCATATTTCTGTTCAGTATAGGCCAATTGGAGTGAACCGTTCAGAAAGTATCAGTAATGGGGATGGGAAAGCTTTAGGAGTTCCTAAAACATATTTCCCTCTCAGGAAAGGAGGGAGTGTGACTTTATATCAAGATGCACATATACCAGATGGTATGCTACCTGAAATTCCACTTGAGGGTGGAAAAGTGTTTCAGCATAATAAATGTTGGGAGGATATATGCCATGCAATTTTGGAAGCTCATCATTTGATATACATTATAGGATGGTCAGTTTACCACCCAGTAAGGCTTGTCAGAGAGGCAAATAAACCATTACCTTCTGGGGGAGAGCTTTCACTTGGAGAGCTGTTGAAGTACAAGTCACAAGAAGGGCTCAGAGTGGTTATGCTGATTTGGGATGACAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTCATGCAGACTCATGATGAAGAAACTAAGAAGTTTTTTAAACATTCCACTGTTGTGGGAACCCTCTTTACGCATCACCAGAAATGTGTGCTTGTAGACAGTCAAGGTTCTGGAAATAATCGGAAAATAACAGCTTTTATGGGTGGTTTGGATCTATGTGATGGTAGATATGATACACCTGAGCATCGGCTTTTTCGTGATCTAGATACAGTCTTTCATAATGATTTTCATAATCCTACATTTCAATTAAATTCGAACTCGTGTGCACCAAGGCAGCCATGGCATGACTTACATTGCAAAATTGAAGGTCCAGCAGCATATGATATATTGACCAATTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGCGACTTCAGGCTCAAAAAGGTGACAAATTGGCATGATGATGCTTTGCTAAGGCTAGACCGAATTTCATGGATTGTCAAACCTTCTCCTTGTTCTTCCAACGGCGATAAATCTGTTCGTGTAACCGATGAAAATGATCCTGAGAGTTGGCATGTGCAGATATTTAGGTCCATAGATTCAGGATCCGTGAAGGGATTTCCAAAGGATGTTGACAAAGCTAAGGCTCAGAATCTTTTTTGTGGAAAAAATTTGAAAGTAGATCAAAGCATCCATACTGCTTATGTAAGAGCAATAAGATCGGCTGAGCACTTTATATATATTGAGAATCAGTATTTTTTGGGCTCCTCCTATCATTGGCCTTCATATAAAAATAATGCAGGTGCAAATCACTTGGTTCCCATGGAGTTGGCTTTGAAAATTGCTGGTAAGATCAGTGCGAATCAACGTTTTTGTGTATATATAGTTATACCAATGTGGCCAGAGGGTGTTCCAACAAGTGCTGCTGTTCAAGAAATATTGTTCTGGCAGGGACAAACAATGTCTATGATGTACAAGATTATAGCTGATGCCCTTGAAAAAGCAGGTCTCTCCGATCAGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCCCGATCCACAAATATTCCACCAACACCAAATCCATCTGAAAACCGCGCTTTGGTAGCAGCTAAAAAATTCAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGGTAGTTGATGACGAATACGTAATTATTGGATCAGCAAACATTAACCAGAGATCAATGGATGGTTCAAGGGACACAGAAATAGCTATGGGTGCTTATCAACCAAAATATACGTGGACAGAAAAGAATGCTCATCCACGTGGCCAGGTGTATGGATACAGAATGTCACTGTGGGCCGAGCACCTTGGTAGTCTTGATCATTATTTTGCTGAACCTCACAGCCTGGAATGTGTTAGACATGTCAACAAAATTGCTAAACAAAACTGGGACATGTATGTGTCTGAGGAAGGGAGGATGAGGGGACACTTGATGCAGTATCCAGTTAAGATCAGCAGGGATGGAAAAGTCAGTGCACTTGATGATTATGAATCCTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACCAAATTCACTTCCGGATGCACTAACCACCTGA 2688 0.4126 MATTTLALSRAMVSTSLMRRQPMTMRLKAYPKVGEAVLFGVKRGRGGHSWLCHLWKVEMDCHGGISKSSPNREQEGLKETVFLHGDLDLLIIEAKSLPNLDLSSEAVRKCITMGSMCHPPFIKGLKTHSGKDKMITSDPYVSVCIAGATIAQTRVIPNCENPLWDEQFIVPVAHPAQKLEFLVKDNDILGAELIGVVEIPVHKIISGKTVNDWFPIIGQYGSCLKPYPELHISVQYRPIGVNRSESISNGDGKALGVPKTYFPLRKGGSVTLYQDAHIPDGMLPEIPLEGGKVFQHNKCWEDICHAILEAHHLIYIIGWSVYHPVRLVREANKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVVGTLFTHHQKCVLVDSQGSGNNRKITAFMGGLDLCDGRYDTPEHRLFRDLDTVFHNDFHNPTFQLNSNSCAPRQPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWIVKPSPCSSNGDKSVRVTDENDPESWHVQIFRSIDSGSVKGFPKDVDKAKAQNLFCGKNLKVDQSIHTAYVRAIRSAEHFIYIENQYFLGSSYHWPSYKNNAGANHLVPMELALKIAGKISANQRFCVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIADALEKAGLSDQYHPQDYLNFYCLGKREPRSTNIPPTPNPSENRALVAAKKFRRFMIYVHAKGMVVDDEYVIIGSANINQRSMDGSRDTEIAMGAYQPKYTWTEKNAHPRGQVYGYRMSLWAEHLGSLDHYFAEPHSLECVRHVNKIAKQNWDMYVSEEGRMRGHLMQYPVKISRDGKVSALDDYESFPDVGGKILGSPNSLPDALTT 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00951 895 Gene3D C2 domain 81 236 IPR035892 -
Pumo6g00951 895 Pfam Phospholipase D Active site motif 399 433 IPR001736 GO:0003824
Pumo6g00951 895 Pfam Phospholipase D Active site motif 743 769 IPR001736 GO:0003824
Pumo6g00951 895 SUPERFAMILY Phospholipase D/nuclease 258 503 - -
Pumo6g00951 895 CDD C2_plant_PLD 80 237 - -
Pumo6g00951 895 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 742 769 IPR001736 GO:0003824
Pumo6g00951 895 PIRSF PLD_plant 72 895 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pumo6g00951 895 SMART C2_3c 86 213 IPR000008 -
Pumo6g00951 895 Pfam Phospholipase D C terminal 817 885 IPR024632 -
Pumo6g00951 895 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 398 433 IPR001736 GO:0003824
Pumo6g00951 895 SUPERFAMILY Phospholipase D/nuclease 574 827 - -
Pumo6g00951 895 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 83 238 IPR035892 -
Pumo6g00951 895 SMART pld_4 742 769 IPR001736 GO:0003824
Pumo6g00951 895 SMART pld_4 398 433 IPR001736 GO:0003824
Pumo6g00951 895 ProSiteProfiles C2 domain profile. 66 214 IPR000008 -
Pumo6g00951 895 Gene3D Endonuclease Chain A 291 516 - -
Pumo6g00951 895 Pfam C2 domain 85 216 IPR000008 -
Pumo6g00951 895 Gene3D Endonuclease Chain A 557 792 - -
Pumo6g00951 895 PANTHER PHOSPHOLIPASE D 79 884 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00951 Pumo-Chr6 11757489 11769924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00951 75 894 Phospholipase D Gene Family (Wang group) AT2G42010 53.608 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00951 K01115 - gmx:100779740 1645.17