Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00947 ATGGAGAAGTACGAGGTAGTGAATGAGGATATAGGGCTTGGAAGATTTGCGGTGGTAAGGCTTATGCGTCACAAAGAGACCAAAGATCTCGTTGCCGTCAAATACATCCCACGGGACAACAGGAGGCTTGAGAGCATAGCAAGGGAAATCATAAACCATAGATCTCTACGCCATCCGAATATTGTTCGATTCAAGGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCGGGTGGAGAGTTATTTAACCGAGTTTGCGGAGGAAGATTACGTGAAGGCGAGGCTCGATATTTCTTCCAGCAGTTGATTACAGGAGTTAGTTATTGCCATGACAAGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTATTGGATGGCAGCCCTGCAAATCGTCTTAAAATTTGTGATTTCGGCTATTCTAAGTCATACCTACTTCATTCGAGGCCTCATTCAATGATAGGAACTCCAGCCTATATTGCACCAGAGATCCTGTCAGGGAAAGTTTATGATGGAAAGTTGGCAGATGTATGGTCATGTGGAGTAATACTTTATACAATGCTGGTAGGAGCATTGCCATTTGAGGACAAAGAAGATACCCAAAATCTCCAGAAAACCATAAATCGAGTTATGGCTGTTCAATACAAGTTCCCCGACAAAGTTTGCATATCTCAAGACAGTAAAAATCTGATATCTCGCATTTTTGTGGCAAATCCAGCAATGAGAATCACCATGAAGGGAATCAAGTCACATCCATGGTTTTTAAAGAACTTGCCTAAGGAATTGAGAGAAGGGGCTCAAGCTGTTTACTACAACGAAGAAAATACAAAATCTCTTCAAAGTATAGAAGAGATCATGAAGATTGTCAACGAGGCCAAAACTACACCTGCAGCTTCCAGTCCAAATCTATAG 930 0.4183 MEKYEVVNEDIGLGRFAVVRLMRHKETKDLVAVKYIPRDNRRLESIAREIINHRSLRHPNIVRFKEVALTPTHLAIVMEYAAGGELFNRVCGGRLREGEARYFFQQLITGVSYCHDKEICHRDLKLENTLLDGSPANRLKICDFGYSKSYLLHSRPHSMIGTPAYIAPEILSGKVYDGKLADVWSCGVILYTMLVGALPFEDKEDTQNLQKTINRVMAVQYKFPDKVCISQDSKNLISRIFVANPAMRITMKGIKSHPWFLKNLPKELREGAQAVYYNEENTKSLQSIEEIMKIVNEAKTTPAASSPNL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00947 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pumo6g00947 309 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00947 309 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00947 309 Pfam Protein kinase domain 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00947 309 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Pumo6g00947 309 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Pumo6g00947 309 FunFam Serine/threonine-protein kinase SRK2A 81 268 - -
Pumo6g00947 309 SUPERFAMILY Protein kinase-like (PK-like) 8 278 IPR011009 -
Pumo6g00947 309 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pumo6g00947 309 PANTHER SERINE/THREONINE KINASE 2 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00947 Pumo-Chr6 11723299 11726509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00947 1 264 CBL-interacting serine-threonine protein kinases AT5G01810 45.455 5.32e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo6g00947 Pkinase 8.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00947 K14498 - gmx:100787825 546.969