Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00944 ATGGAGTCCATTTTTGTGATTCTTCTGATCTTTATGGTGGCATCAAATCCATGCTCAGCAGCACCCTCTCCCACCATTTCCCCTACCAACAATTCTACATGCCCAGTGGCCATGGATTATGTGCAAACAGTCCCTTGGAACAGCTCTTCCTGCCTCAACTTCCAACCCTTGGAATCACAAAACCAAACAAGAACAAGTCCTTGTTGCCAAACTCTTCTATCCCTCTTTGGCATAGCACTTGCAAAAAACCTCAAGAAAAACTCTCTTTTCCAACTTGCTAGCCTCCCAGCCTCTATCTCATGCCTTGAACACTTCCAATCCAACCTCACATCACTCTCACTTCCCAACAACCTTGTGTCTTCATGCTTTGATCCATTTCAATTTGTCATCACTCCCAACATCTGTGCTCATATTCAAACTATTGAAGATTGGGACATCAGGCTTGGTCCTACACCACAGCTCAGCACTGCCTGTAAACCAGACCTCACTGATCCTGACCAATGCAGAGAGTGTGTGGCTGAGGGGGACAAGGTTCAACAGAGGCTGATTTCTATTGATGGTAATAATTCACATTCCCAAGATTGCTTTTACTTCGCAACACTTTACCTGGCTGGAGTTGTGAATGAGCTTGGCCCTGAAAGTAGAGGTGTTATGTCTTGCATTTTGATTTTGTTGCTTAATTCACAAGTTGATTCAAGGGATGGCCGTAATGCTCTTGTGTTTGGTTTAATTGTAGCTTCACTTGCATTCCTGGTAATCATGTTGTTAGGATTAGGATTTTATTTTTGGTACACCAAGAGAAGAAGTGTTGAAAATTTGCTAGCCTATGCTGATCTACAGGAACAAAGGTTCAGCCCAAGGCTGAGACCAAATGCTGCAGGGTTAACTTGGTTTGAATTTGAGGATCTTGTGAGGGCAACCGACAATTTTTCACCTCAGAACTTGATTGGAAGAGGTGGGTTTGGGTTGGTTTACAAGGGCATTCTACCTGATGGCTCAATGGTTGCAGTGAAAAGGCTTGAAGAATCAGATTCTCAAGGAGATGCTTTGTTCTACAGTGAGGTGGAGATTGTTAGCAACTTGAAGCACCGTAATCTGGTGCCGCTAAGAGGGTGTTGTGTGGTTGATGAGGAGGATGAGAATCACAATTTTGAGTACAGAAAAAGGTATCTAGTTCATGACTATATGCCAAATGGTAGCCTTGAAGACCATCTCTTTCCAACCAAATTAGACAATCAAAATACAAAGAAGTCCCTGACTTGGCCTCAAAGAAAAAGCATAATCTTGGATGTGGCAAATGCTTTGGTTTATTTGCACTATGGAGTTAAACCTGCAGTGTATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCAAGGGTTGGAGATTTTGGGCTAGCCAAACAAAGCAGTGAAAGCAGGTCTTATCTAAATACTAGAGTATCTGGAACTCGCGGATATGTAGCACCTGAATATGCACTTTATGGTCAGCTAACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTATTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAGTTGTCTACATCAGGGGCACCAGTTTTCTTGATCACAGATTGGGTTTGGTCATTGATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATTTTAGGAGATGGAAATTCTTCTAGAAACATAATGGAGAGGTTTTTGCTGGTTGGACTTCTTTCTTCTCATGTAATGGTTGCTTCAAGGCCAACAATTTTGAATGCTTTGAAGATGTTAGAAGGGGATATTGAGGTCCCACCAATTCCAGATAGGCCACTGACTAATGGGCACTATGTGTTATACAGTGGTGATTGCTCTGGGGTGAGCTCAGGATGTGGCTTTGTGAGCTCATGA 1911 0.4265 MESIFVILLIFMVASNPCSAAPSPTISPTNNSTCPVAMDYVQTVPWNSSSCLNFQPLESQNQTRTSPCCQTLLSLFGIALAKNLKKNSLFQLASLPASISCLEHFQSNLTSLSLPNNLVSSCFDPFQFVITPNICAHIQTIEDWDIRLGPTPQLSTACKPDLTDPDQCRECVAEGDKVQQRLISIDGNNSHSQDCFYFATLYLAGVVNELGPESRGVMSCILILLLNSQVDSRDGRNALVFGLIVASLAFLVIMLLGLGFYFWYTKRRSVENLLAYADLQEQRFSPRLRPNAAGLTWFEFEDLVRATDNFSPQNLIGRGGFGLVYKGILPDGSMVAVKRLEESDSQGDALFYSEVEIVSNLKHRNLVPLRGCCVVDEEDENHNFEYRKRYLVHDYMPNGSLEDHLFPTKLDNQNTKKSLTWPQRKSIILDVANALVYLHYGVKPAVYHRDIKATNILLDADMRARVGDFGLAKQSSESRSYLNTRVSGTRGYVAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALELSTSGAPVFLITDWVWSLMKSGNIGEALDASILGDGNSSRNIMERFLLVGLLSSHVMVASRPTILNALKMLEGDIEVPPIPDRPLTNGHYVLYSGDCSGVSSGCGFVSS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00944 636 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Pumo6g00944 636 Pfam SPARK 30 196 IPR043891 -
Pumo6g00944 636 FunFam Receptor-like serine/threonine-protein kinase At4g25390 274 395 - -
Pumo6g00944 636 SUPERFAMILY Protein kinase-like (PK-like) 293 599 IPR011009 -
Pumo6g00944 636 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 615 - -
Pumo6g00944 636 Pfam Protein kinase domain 313 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00944 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pumo6g00944 636 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Pumo6g00944 636 Gene3D Phosphorylase Kinase; domain 1 276 395 - -
Pumo6g00944 636 ProSiteProfiles Protein kinase domain profile. 310 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00944 636 SMART serkin_6 310 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00944 636 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 396 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00944 Pumo-Chr6 11682965 11685110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00944 26 616 Receptor kinase-like Gene Family AT1G11050 56.951 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pumo6g00944 Pkinase 7.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00944 - - gmx:100788367 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01190 2 17077777 17080754 Pumo6g00944 6 11682965 11685110 PCT