Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00919 ATGGTTTTATTATCAGCTACTCAACATTGGCGTAGTGGACCAGAAGACAAGCCAGTGTTGTGCAACGCATGTGGAATAAGATACACGAAACGGGGAAGCATTGGCCTTCAGGACTATTTTCCCAACCATTTTAAACCTGAGTACCTTGATAACCTTAAAAATCTAGAGGGTAGAAACAATGATCTCCATGGTTCAAGCTATGTTACAGATTCAAGTAATGATACTAGTGGAAAAAATCCATGTTTATGGAATCCTAATGTCCCTTCACGGAAACGTTCACGCGTGGTGTATATGGAGATAACACCAATGCAGAAGTTTCAAAAACAACTACTCAAGATGTGGAGAAATGAAGAGAAAGCAAATAAGTCATCCCAAGAACCAGAAGAGGCCATATTGATCAATAATGTCAATAACTTCATACCGAGTAATGAAATAGGGCTTGGCTGTGTTCTACTTAAACTAGATGATGATTCTGCATAG 480 0.3896 MVLLSATQHWRSGPEDKPVLCNACGIRYTKRGSIGLQDYFPNHFKPEYLDNLKNLEGRNNDLHGSSYVTDSSNDTSGKNPCLWNPNVPSRKRSRVVYMEITPMQKFQKQLLKMWRNEEKANKSSQEPEEAILINNVNNFIPSNEIGLGCVLLKLDDDSA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00919 159 PANTHER OSJNBB0038F03.10 PROTEIN 7 158 IPR044589 -
Pumo6g00919 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 42 - -
Pumo6g00919 159 Pfam GATA zinc finger 6 32 IPR000679 GO:0006355|GO:0043565
Pumo6g00919 159 Gene3D - 4 61 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00919 Pumo-Chr6 11374384 11374941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00919 4 47 C2C2-Gata Transcription Factor Family AT5G47140 50.000 8.45e-08 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pumo6g00919 GATA 1.4e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00919 - - gmx:102667887 226.098