Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00908 ATGGAAAACATGCATTGGTCAAACTTAATGCTACTGTGTTTCTTGGGAATGCTTCTAACGCCTTCCTTGTGTCAAAGTGATGCAAGTACAGCTGTGTACATTGTTACTCTGAGACAAGCTCCTGCTTCTCACTATCATCATGAGTTGATCACAGTGGGTAACAACTCTAGACATGGTTCATCTGGGAGAAGAAGAACAAGAACTAGAGTTCACAAACCAAGACATCAGAATGTTACAAAGCCAGATAGGAGACGTGGTTCATACTTTGCCCGAGTTCATGACTCGTTGTTGAATAAGGTGTTTAATGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGTTGGTTACCCAACAGCAGGCGGATAAACTGTCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTGAGGACTGCAACCACACACACTCCACAATTTTTGGGTCTGCCACAGGGAGCTTGGTTGCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAAATCTGAACATCCCTTCCCTGTTCCTGCTCATTTCTCTGGCGTCTGTGAGGTTACTCCGGATTTTCCGTCCAGTTCTTGCAATAGGAAGCTTGTTGGGGCCAGACATTTTGCAGCATCTGCTATAACAAGAGGAATATTTAACTCATCTCAGGACTATGCTTCTCCCTTTGACGGTGATGGCCACGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGGTCGTTGCTGGGCAATTTTTTGGAAATGCTAGTGGGATGGCTCCTCATTCACACATTTCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCAGCAGATGTTGTTGCAGGTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTTCTGGTATTGCAACTTTCTTCAATCCAATAGATATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGCAATACTGGACCATCACCTATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCCACATCTCACGATCGAGTTTATAGCAACTCCCTATGTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGGCACATATGACAACACAATGTTCAAACTGATTCATGCACGACATGCTTTGAACAAAAACATAACAGTTACTGATGGTATGTATATTGGTGAGTGTCAAGATTCAAGTAAGTTCAGTCAGGATTTGGTCCAGGGCAACCTCCTGATCTGTAGCTATTCAGTTCGATTTGTGCTTGGGCTCTCCACCATCAAACAGGCCTTAGAAACAGCCATGAACCTTAGTGCAGTTGGTGTTGTTTTCTCCATGGATCCATTTGTGACTTCTTTTCAGCTTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTCCATCTTCAAATGATTCCAAGATATTACTGCAATACTACAATTCTTCCCTGGAAATAGATGGGAATTCAAACAAAGTTGTTAAATTTGGGGCTGTTGCTAGCATTGGTGGTGGATTAGAAGCAAACTACAATAATGAGGCCCCAAAGGTTGTGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTATGAAACCCAATTTGGTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCTGTTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAATTTTCCCAATTTTAGTCCTGCAGCCATTGGATCTGCACTTTCCACCACAGCTTCTCTGTATGACAACAATGGGAGGCCAATAATGGCACAGCGATCATATCCCTCCATAAACCAAAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCAGGATTGCTTTTTGATTCTAGTTATGATGATTACATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAATTCAACACTATATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAAGGTTGAACCAATCTAGAGTAATACAAAGAACAATCCAAAACATTGCTGGAAATGAAACATACAATGTTGGTTGGAGTGCTCCGTATGGAACTTCCATGAAAGTGTCTCCTAATCACTTCTCTCTTGCCAGTGGGGAGAGACTAGTCTTGTCTGTGATCTTCAATGCAACCAGCAACAGTTCTGCTGCCAGCTTTGGGAGAATTGGTTTGTATGGTAACCAAGGTCATGTTGTCAACATTCCTGTGGCAGTCATTTTTAAAATCTTATAA 2526 0.4279 MENMHWSNLMLLCFLGMLLTPSLCQSDASTAVYIVTLRQAPASHYHHELITVGNNSRHGSSGRRRTRTRVHKPRHQNVTKPDRRRGSYFARVHDSLLNKVFNGEKYLKLYSYHYLINGFAVLVTQQQADKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWLQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSEHPFPVPAHFSGVCEVTPDFPSSSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGQFFGNASGMAPHSHISIYKALYKRFGGFAADVVAGIDQAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLCLGNNVTIPGVGLAPGTYDNTMFKLIHARHALNKNITVTDGMYIGECQDSSKFSQDLVQGNLLICSYSVRFVLGLSTIKQALETAMNLSAVGVVFSMDPFVTSFQLNPVPMKMPGIIIPSSNDSKILLQYYNSSLEIDGNSNKVVKFGAVASIGGGLEANYNNEAPKVVYYSARGPDPEDSLPHEADIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHVAGLAALIKQNFPNFSPAAIGSALSTTASLYDNNGRPIMAQRSYPSINQNLSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSTPTVLNYTGQNCWTYNSTLYGPDLNLPSITIARLNQSRVIQRTIQNIAGNETYNVGWSAPYGTSMKVSPNHFSLASGERLVLSVIFNATSNSSAASFGRIGLYGNQGHVVNIPVAVIFKIL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00908 841 ProSitePatterns Serine proteases, subtilase family, serine active site. 620 630 IPR023828 -
Pumo6g00908 841 Pfam Subtilase family 174 659 IPR000209 GO:0006508|GO:0008236
Pumo6g00908 841 Pfam Fibronectin type-III domain 743 836 IPR041469 -
Pumo6g00908 841 SUPERFAMILY Subtilisin-like 149 701 IPR036852 GO:0004252|GO:0006508
Pumo6g00908 841 ProSiteProfiles Serine proteases, subtilase domain profile. 153 697 - -
Pumo6g00908 841 Gene3D Peptidase S8/S53 domain 176 710 IPR036852 GO:0004252|GO:0006508
Pumo6g00908 841 MobiDBLite consensus disorder prediction 52 84 - -
Pumo6g00908 841 CDD Peptidases_S8_3 149 656 IPR034197 -
Pumo6g00908 841 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 179 190 IPR023827 -
Pumo6g00908 841 CDD PA_subtilisin_like 398 530 - -
Pumo6g00908 841 PRINTS Subtilisin serine protease family (S8) signature 619 635 IPR015500 -
Pumo6g00908 841 PRINTS Subtilisin serine protease family (S8) signature 254 267 IPR015500 -
Pumo6g00908 841 PRINTS Subtilisin serine protease family (S8) signature 174 193 IPR015500 -
Pumo6g00908 841 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 147 IPR037045 -
Pumo6g00908 841 Pfam Peptidase inhibitor I9 32 149 IPR010259 -
Pumo6g00908 841 Gene3D - 389 557 - -
Pumo6g00908 841 Gene3D - 714 838 - -
Pumo6g00908 841 MobiDBLite consensus disorder prediction 60 79 - -
Pumo6g00908 841 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 104 836 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00908 Pumo-Chr6 11252361 11259073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00908 9 840 Subtilisin-like Serine Gene Family AT4G20430 67.101 0.0 1152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00908 - - gmx:100814065 1558.12