Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00833 ATGGCAATAACACCTTTTGGTAGTACTTCTGCTGCACAATGGGGAATTCATCCTCAGCTATTACTAAGATCCAGTATCACAGGCAAGGTTGCATCATCCAGCCACAATGCTACCGGCAGGGTAAGCTTTATGGCTGCAACAAGTTCAAGCTTTTTTTCTCGAGACACACTACTTAATGTGGGTGCGCCCCAAACTTTTAATCGTCGGAAGGGATCAAGGTTGATTGTTAGAGCAGATGGTGATTATTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTCAACAAAGAACCTGGAGCTGAACAAAAATTTAAGGAAATTAGCAATGCATATGAGGTGTTATCAGATGATGAGAAACGATCCATATATGACAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGGATGGGGGATTTCAGCAATCCATTTGATCTGTTTGAATCACTGTTTGAGGGCATGAATCGCGGTGCAGGTTCCAGAGGTTCTTGGAATGGAGCAATTGATGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGCATAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGCTGTGGAACTTGCAACGGTTCAGGGGCTAAACCAGGGACTACACCATCCAGATGTAACACTTGTGGAGGTCAAGGCCGGGTTGTCTCGTCAACCAGAACTCCATTAGGCATCTTCCAGCAGTCAATGACATGCTCTTCATGCAATGGGACTGGAGAAATTTCAACACCTTGCAATACATGTTCCGGTGATGGTCGGGTGAGGAAATCGAAACGGATAAGTCTGAAGGTCCCAGCTGGTGTGGACTCTGGTAGTCGTCTAAGGGTCCGAAATGAGGGGAATGCTGGAAGGAAAGGTGGTTCCCCTGGCGACCTCTTTGTAGTTATTGAGGTTATCCCAGATCCTGTCCTTAAACGTGATGACACCAACATTTTATACACCTGCAAGGTTTCGTATATTGATGCAATCCTGGGGACTACAATTAAGGTTCCTACTGTAGACGGAACGGTCGATTTGAAAATTCCTGCTGGGACACAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTGAATAAAGACAATATGAGGGGTGATCAGTTGGTTCGTGTGCAAGTTGAAATCCCTAAAAGACTGAGCAATGATGAGAGAAAGCTTATTGAGGAACTTTCTGATTTAAGCAAAGGCAAGACTGCCACTGGTAGGAGATAA 1311 0.4401 MAITPFGSTSAAQWGIHPQLLLRSSITGKVASSSHNATGRVSFMAATSSSFFSRDTLLNVGAPQTFNRRKGSRLIVRADGDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGAGSRGSWNGAIDGEDEYYSLVLNFKEAVFGIEKEIEISRLESCGTCNGSGAKPGTTPSRCNTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRKGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKDNMRGDQLVRVQVEIPKRLSNDERKLIEELSDLSKGKTATGRR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00833 436 CDD DnaJ 81 134 IPR001623 -
Pumo6g00833 436 Gene3D - 219 282 - -
Pumo6g00833 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 420 IPR008971 GO:0006457|GO:0051082
Pumo6g00833 436 PRINTS DnaJ domain signature 137 156 IPR001623 -
Pumo6g00833 436 PRINTS DnaJ domain signature 117 137 IPR001623 -
Pumo6g00833 436 PRINTS DnaJ domain signature 83 101 IPR001623 -
Pumo6g00833 436 PRINTS DnaJ domain signature 101 116 IPR001623 -
Pumo6g00833 436 ProSitePatterns Nt-dnaJ domain signature. 122 141 IPR018253 -
Pumo6g00833 436 NCBIfam molecular chaperone DnaJ 81 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pumo6g00833 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 341 IPR008971 GO:0006457|GO:0051082
Pumo6g00833 436 SMART dnaj_3 80 137 IPR001623 -
Pumo6g00833 436 FunFam Putative Mitochondrial DnaJ chaperone 274 324 - -
Pumo6g00833 436 Hamap Chaperone protein DnaJ [dnaJ]. 78 432 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pumo6g00833 436 FunFam Chaperone protein dnaJ 1, mitochondrial 329 436 - -
Pumo6g00833 436 CDD DnaJ_zf 219 282 IPR001305 GO:0031072|GO:0051082
Pumo6g00833 436 SUPERFAMILY Chaperone J-domain 79 174 IPR036869 -
Pumo6g00833 436 Pfam DnaJ C terminal domain 194 409 IPR002939 -
Pumo6g00833 436 FunFam Molecular chaperone DnaJ 211 287 - -
Pumo6g00833 436 Gene3D - 329 435 - -
Pumo6g00833 436 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 286 IPR036410 -
Pumo6g00833 436 CDD DnaJ_C 190 412 - -
Pumo6g00833 436 FunFam Chaperone protein dnaJ A6 chloroplastic 78 181 - -
Pumo6g00833 436 ProSiteProfiles Zinc finger CR-type profile. 206 287 IPR001305 GO:0031072|GO:0051082
Pumo6g00833 436 Gene3D DnaJ domain 78 182 IPR036869 -
Pumo6g00833 436 Gene3D - 189 324 - -
Pumo6g00833 436 Pfam DnaJ domain 81 142 IPR001623 -
Pumo6g00833 436 ProSiteProfiles dnaJ domain profile. 81 145 IPR001623 -
Pumo6g00833 436 Pfam DnaJ central domain 219 282 IPR001305 GO:0031072|GO:0051082
Pumo6g00833 436 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 42 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00833 Pumo-Chr6 10425831 10429135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00833 82 142 C2H2 Transcription Factor Family AT1G74250 44.776 2.38e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00833 K03686 - gmx:100811006 843.958