Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo6g00822 | ATGGCTGAGGCCAGACACTACGTTCTCCCCTCTCAATTCGATATTAAGCAAATTATTTCAGAAGCACAGCATCGATGGCTACGTCCGGCTGAAATTTGTGCAATTCTCAGTAATCATAACAAGTTTCGAATTGCTCCAGAACCTGCACATATGCCACCAAGTGGTTCACTTTTCTTATTTGATCGGAAGGTGCTGAGATACTTCAGAAAGGATGGCCATAACTGGAGGAAGAAAAAAGATGGAAAAACAGTGAGAGAAGCTCATGAGAGACTAAAGGCTGGAAGTATGGATGTGTTGCACTGCTACTATGCCCATGGAGAAGAAAATGAAAGTTTTCAAAGACGCACGTATTGGATGCTTGAAGAGGAACTCTCTCACATTGTTCTCGTTCATTATCGACAAGTGAAGGGAACCAAGGCAAATTTTACATGTGCTAAAGAAAATGAAGAATCCCTTCCTTATGCTCAACAAACTGATAAAATTATGCCCAAAACAGAGATGGACACTTCTTTATCTTCTACTCTTCATCCACATAGTTACCAGGTTCCTTCACAAACTATGGATACAAGCATGAACAGTGCCCAAGCATCAGAATATGAAGAAGCTAAATCTGCATTCAATAACCATGCAAATTCTGAGTTTTATTCTTTCCTCAAGTTACAACGCCCTGTTGAGAAGATTACACCTCAACCTGCTGATTCTTATTCTCCTCGGCCACTCATAAATGATCAAGAGAAGTTGCCTGTCATTCCTGGGGTGAATTATATCTCACTCACTCAAGACAATAAAATCAAAGACATTCATAATGTTGGATTGACATATGAATCCCCAAAACCCCTTGGCTTTTCCTCATGGGAAGGTATCTTAGAAAATAATGCTGGAAGTCAACATGTGCCTTTTCAGCCCTTATTTCCTGGAACACAACCTGATAACATGGGAATAAATAGCAATTTTTCTCAAGGAGATGAGATAATGGTGCCATATTTGATCACCAGCATTGCTAAGCAGCATGAGAATGGAAGTCTCATACAAGCTGAAGGAAATTGGCAGGCTTATGATGTTGATTCTTTACGCATGTCCAGTTGGCCTATAGATAGTGCTTATTCAGGCTCAACATGTAAGGTAAGTTGTAGCAACCGTGAGCAGGAAGTTAATGAAGTTGATTTTCAGAAATCCTTGGAACAGTGTCTTCTACATCCACACAAACAAAACAATGTTCTCATGCAAAATGATCCTCAAGAAAAACTTTTGAATGAAAAAGGAAAGATAAAATCAGATCTAGAGGCCAATAGAATCCTGGATGGAATAGAAGACACATATTTCACTTTTAAAAGGACTCTGTTAGATGGATCTCCACCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAGCTTGGAGATGTGGAAGAATCAAATAAACCATCCACTTCTGGTGGTTATTGGGATACAGTTGAAAGCGAAAATGAGGTTGGCAACACAACTATTCCTTCCCAAGGGCACCTGGACACCTATGTATTGGATCCATCTGTTTCCCATGATCAGCTTTTTAGCATAATTGACTATTCCCCAAGCTGGGCATTTGAAGCGTCAGAAATTAAGGTTATCATTTCTGGACGATTCTTAAGAAGTCAACATGAAGCAGAACAATGTAAATGGTCATGCATGTTCGGCGAAGTAGAAGTGCCAGCAGAGATCATTGCAAAAGGTGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAATAGATTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAAGTCAACTATACTCGAGAAGTTAACACTGCAGGTGAGAATAGAGGCAGCACTTTCGATACTTTTAGTATCCGATTTGGAGAACTTTTGTCGCTGGGGCATGCCTTTCCTCAGAATTCAGATTCAATTAGTGTAAGTGAGAAATCTCAACTGAGAAGTAAAATCAATTCTTTACTGAGGGAGGAGGATGATGATTGGGACAAGCTACTGAAACTTACTCTAGAGAAAGATTTTTCTCCAGAAAATTTACAGGAGCAGCTGCTTCAAAATCTTCTGAAAGATAAGTTACATGCATGGCTCCTTCACAAAATAACTGAAGAAGGGAAAGGCCCTAATGTATTAGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCAGCTGCTCTTGGCTATGATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTGAATGTGAACTTTCGTGATGTAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGGGAGCGCACTGTTGCTTTCCTCATCTCTCTTGGCGCTGCACCCGGAGCACTGACTGATCCATGTCCAGAACATCCTTCTGGTAGAGCACCAGCTGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCAGGGTATCTTGCAGAATCTTCACTGAGTGCACTCCTCACAACTCTTGATTTGAACAGGGACATGGGAGAAAATTCTGGAGCAAAAGTAGTCCAAAGACTCCAAAACATTGCTCAAGTTAATGATCTTGATGGTCCATCATATGAACTGTCATTGAAAGATTCACTGGCTGCAGTGTGTAACGCCACCCAAGCTGCAGCTCGTATTCATCAAGTTTTCAGAATGCAATCATTCCAGAGAAAACAACTGAAGGAATATGGTAATGACAAACTTGGAATATCTGATGAACGTGCTCTTTCACTTGTAACAATGAATGTGAAATCACACAAGTCTGGACCACGTGATGAGCCTGTACATGCTGCTGCAATACGAATCCAGAACAAATTCCGCAGTTGGAAGGGAAGAAGAGAGTTTTTGACGATTCGACAACATATAGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAGCTGTGGGAAGATAATTTGGTCCGTTGGAATCCTGGAGAAGGTTATTTTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTTAAATCGGAGGCCAATTCTGAGGGAACTATGATACAAGATGTATCTTCAACAGAGGATGACGATGATTTCTTAAAAGAAGGCAGGAAGCAAACAGAGCAAAGGTTGCAGAAAGCCCTAGCTAGGGTGAAGTCAATGGCTCAGTATCCAGAGGCAAGAGACCAATACCATAGGCTGTTGAATGTTGTAACTGAGATTCAAGAAAATCAGGTAAAGCATGAGAGCAGTTTTAACAATTCAGAAGAACCAAGAGAATTCGGTGACCTCATTGATCTTGAAGCATTGTTGGACGAAGATATTTTCATGCCTACAGCGGCTTAG | 3324 | 0.4137 | MAEARHYVLPSQFDIKQIISEAQHRWLRPAEICAILSNHNKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSMDVLHCYYAHGEENESFQRRTYWMLEEELSHIVLVHYRQVKGTKANFTCAKENEESLPYAQQTDKIMPKTEMDTSLSSTLHPHSYQVPSQTMDTSMNSAQASEYEEAKSAFNNHANSEFYSFLKLQRPVEKITPQPADSYSPRPLINDQEKLPVIPGVNYISLTQDNKIKDIHNVGLTYESPKPLGFSSWEGILENNAGSQHVPFQPLFPGTQPDNMGINSNFSQGDEIMVPYLITSIAKQHENGSLIQAEGNWQAYDVDSLRMSSWPIDSAYSGSTCKVSCSNREQEVNEVDFQKSLEQCLLHPHKQNNVLMQNDPQEKLLNEKGKIKSDLEANRILDGIEDTYFTFKRTLLDGSPPEEGLKKLDSFNQWMSKELGDVEESNKPSTSGGYWDTVESENEVGNTTIPSQGHLDTYVLDPSVSHDQLFSIIDYSPSWAFEASEIKVIISGRFLRSQHEAEQCKWSCMFGEVEVPAEIIAKGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNYTREVNTAGENRGSTFDTFSIRFGELLSLGHAFPQNSDSISVSEKSQLRSKINSLLREEDDDWDKLLKLTLEKDFSPENLQEQLLQNLLKDKLHAWLLHKITEEGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVAFLISLGAAPGALTDPCPEHPSGRAPADLASANGHKGIAGYLAESSLSALLTTLDLNRDMGENSGAKVVQRLQNIAQVNDLDGPSYELSLKDSLAAVCNATQAAARIHQVFRMQSFQRKQLKEYGNDKLGISDERALSLVTMNVKSHKSGPRDEPVHAAAIRIQNKFRSWKGRREFLTIRQHIVKIQAHVRGHQVRKSCGKIIWSVGILEKVILRWRRKGSGLRGFKSEANSEGTMIQDVSSTEDDDDFLKEGRKQTEQRLQKALARVKSMAQYPEARDQYHRLLNVVTEIQENQVKHESSFNNSEEPREFGDLIDLEALLDEDIFMPTAA | 1107 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo6g00822 | 1107 | Gene3D | Immunoglobulins | 517 | 613 | IPR013783 | - | |
| Pumo6g00822 | 1107 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 13 | 1070 | - | - | |
| Pumo6g00822 | 1107 | FunFam | Calmodulin-binding transcription activator 2 | 517 | 613 | - | - | |
| Pumo6g00822 | 1107 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 894 | 981 | IPR027417 | - | |
| Pumo6g00822 | 1107 | SMART | ANK_2a | 759 | 788 | IPR002110 | GO:0005515 | |
| Pumo6g00822 | 1107 | SMART | ANK_2a | 798 | 827 | IPR002110 | GO:0005515 | |
| Pumo6g00822 | 1107 | Pfam | IPT/TIG domain | 524 | 599 | IPR002909 | - | |
| Pumo6g00822 | 1107 | Gene3D | - | 684 | 848 | IPR036770 | - | |
| Pumo6g00822 | 1107 | ProSiteProfiles | IQ motif profile. | 933 | 961 | IPR000048 | GO:0005515 | |
| Pumo6g00822 | 1107 | Pfam | IQ calmodulin-binding motif | 958 | 974 | IPR000048 | GO:0005515 |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo6g00822 | K21596 | - | gmx:100798875 | 2060.42 |
Showing 1 to 1 of 1 entries