Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00787 ATGCAGAGAACAGAGTTCTCCCAAACACTTCAATCAAACATGGCTTTCTCAGCCATTGAAACCTGCAAGGTAGAGGAGCCAGTGGTGGTGGACACTGAGAAGGTGGCTTCACAAAATTATGAAAGGTCTCAGTGGGTGCTCAATGCTCCTGATCCCCCAACCACGTGGCACAACATCATGAGTTCTGTGAGGAACACAATTTCACCGTACCAAAAAATCTGTTCTTCTATAAGAGGTCAAACTGGACCTAAAGTTGTGCTTTCCTTCTTGCGGGGCATTTTTCCTATTCTTCATTGGGGTCGTAATTATTCACCAACCAAATTCAGAAACGACTTACTTGCAGGTCTAACCATTGCAAGTCTTTGCATTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGCCTCTATACAAGTGTGGTGCCACCTCTTATCTATGCTTTAATGGGAACTTCAAGAGAAATAGCAATTGGACCCGTGGCCGTGGTATCACTTCTTTTGTCATCAATGATTCAGAAATTAATAGACCCTGCCATTGATCCAAATGGGTATAGAAAGCTTGTTTTCACTACCACTTTCTTTGCTGGCATATTCCAAGCTGCTTTTGGACTCTTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCTCATGCTGCTATTGTTGGATTCATGGCGGGGGCAGCTATAATAATTGGTCTTCAACAGCTGAAGGGACTGTTTGGGATCAATCATTTTACGAACAAAACAGACATAATCTCTGTCATGAAATCCGTTTGGGAATCGGTTCATCATCCCTGGAATCCTCGCAATTTTGTCCTGGGATGTTCATTCTTCATTTTCATCCTGTTTACCAGATTTCTGGGTAAAAGGAATAGGAAACTGTTCTGGCTGCCAGCAATATCCCCTCTTGTATCAGTTGTGCTATCAACTCTTATTGTTTTTGTGACACGAGCTGACAAAAGTGGAGTTAATATTGTGAGACATATAAAAGGAGGACTGAATCCAAGCTCTATCAATCAGATAGACTTGAACACCCCCCATATTGGAGCATTGGCCAAAATTGGACTAGTTGTTGCTGCTGTTGCACTCACTGAATCAGTTGCCGTTGGACGATCTTTTGCATCCATGAAAGGATACCATCTAGATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGATGCTTCACCTCTTGCTATGTTGCAACTGGTTCGTTCTCCCGCACGGTGGTTAATTTCACTGCGGGTTGTGAAACATTAGCGTCAAACATTGTGATGGCCATTGTGGTGATCATATCACTACAATGTTTGACAAAGCTATTGTACTTTACCCCAACTGCTATTCTCGCTTCAATAATCCTTTCAGCTCTTCCGGGACTCATAGACATCAACGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTTGGGGTGCTCTTTGCGTCAGTGGAACTTGGTCTGCTAGTGGCGGTGGCAATATCTTTCACAAAGATAATTTGGATCTCAATTGGAGCAGGCACAGAGACTCTGGGAAGAGTTCCCGGCACAGATGTGTTCTGCGATGTACAACAGTATCCTATGGCTGTTAAGACTCCTGGGGTTGCAATAATACGCGTCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAAAGGATTCTGAAATGGATCACTCGTGAAGAAGCAAAGGGGAACATAGAAGACAACACCAGAAGCATAATTCAGCTCGTAATCCTTGACACCTCTAATTTGGTGAGCATTGACACCTCGGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTGGTCTCAAGTGGAAAGCAGCTAGCAATTGCCAATCCTCGTTGGCAAGTGATTTATAAGCTAAAGGCGACCGACTTTGTCACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTGACTGCAAGCTGGATTTCTGA 2007 0.432 MQRTEFSQTLQSNMAFSAIETCKVEEPVVVDTEKVASQNYERSQWVLNAPDPPTTWHNIMSSVRNTISPYQKICSSIRGQTGPKVVLSFLRGIFPILHWGRNYSPTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLLSSMIQKLIDPAIDPNGYRKLVFTTTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMAGAAIIIGLQQLKGLFGINHFTNKTDIISVMKSVWESVHHPWNPRNFVLGCSFFIFILFTRFLGKRNRKLFWLPAISPLVSVVLSTLIVFVTRADKSGVNIVRHIKGGLNPSSINQIDLNTPHIGALAKIGLVVAAVALTESVAVGRSFASMKGYHLDGNKEMVSLGFMNIIGCFTSCYVATGSFSRTVVNFTAGCETLASNIVMAIVVIISLQCLTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVLFASVELGLLVAVAISFTKIIWISIGAGTETLGRVPGTDVFCDVQQYPMAVKTPGVAIIRVKSALLCFSNANSVRERILKWITREEAKGNIEDNTRSIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKQLAIANPRWQVIYKLKATDFVTRIGGRVFLTIGEAIDCKLDF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00787 668 ProSitePatterns SLC26A transporters signature. 137 158 IPR018045 GO:0008271|GO:0008272
Pumo6g00787 668 Gene3D STAS domain 522 665 IPR036513 -
Pumo6g00787 668 CDD STAS_SulP_like_sulfate_transporter 541 656 - -
Pumo6g00787 668 NCBIfam sulfate permease 95 654 IPR001902 GO:0016020|GO:0055085
Pumo6g00787 668 PANTHER SULFATE TRANSPORTER 62 663 IPR001902 GO:0016020|GO:0055085
Pumo6g00787 668 SUPERFAMILY SpoIIaa-like 545 663 IPR036513 -
Pumo6g00787 668 ProSiteProfiles STAS domain profile. 560 665 IPR002645 -
Pumo6g00787 668 Pfam STAS domain 541 661 IPR002645 -
Pumo6g00787 668 FunFam Sulfate transporter 31 521 667 - -
Pumo6g00787 668 Pfam Sulfate permease family 108 488 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00787 Pumo-Chr6 9631055 9638668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00787 41 663 Inorganic Solute Cotransporters AT5G10180 68.700 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00787 K17469 - gmx:100775538 1211.82