Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00780 ATGGCACTCTCACTCTCCTCCTCCGGCGTACGTGTTCCTTATTGTTCTCCTTCATGTTTTTGGAAACCAAACGGGGAGAGTTGCAAAGCGCCTAGTAAGGTATCATGTGCAGGTCACAATGATAAGAAGAATCCATTGGTTGGAATCGGTATTGGGGTCGTAACGGCTTGTGTGATGGGTTTAACGGCATTGGACGCGGACGCCACGAGAATCGAATACTACGCAACAGTGGGAGAGCCTTTGTGTGAATACAACTATGTAAAGTCTGGCCTCGGTTACTGCGATATTGTTCACTATACTGCGAGATTCGCTGATGGGATAGTATTTGATAGCAGCTATAAACGTGCTAGACCTCTCACTATGCGCATTGGTGTTGGCAAGGTAATCAAGGGACTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAACTGCAGATTCCTCCGCACTTAGCATATGGCCCTGAACCTGCAGGGTGCTTCTCAGGTGACTGCAATATACCCGGCAATGCCACTCTTCTGTATGATATTAATTTTGTTGAGCTTTATTCGGGGAACAGATCAAAGTGA 594 0.4731 MALSLSSSGVRVPYCSPSCFWKPNGESCKAPSKVSCAGHNDKKNPLVGIGIGVVTACVMGLTALDADATRIEYYATVGEPLCEYNYVKSGLGYCDIVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLLYDINFVELYSGNRSK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00780 197 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 25 195 IPR044183 GO:0009507
Pumo6g00780 197 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 97 186 IPR001179 GO:0003755
Pumo6g00780 197 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 92 191 IPR001179 GO:0003755
Pumo6g00780 197 Gene3D - 74 189 IPR046357 GO:0003755
Pumo6g00780 197 SUPERFAMILY FKBP-like 96 189 - -
Pumo6g00780 197 FunFam Peptidylprolyl isomerase 79 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00780 97 192 Calmodulin-binding Proteins AT3G25230 41.237 2.61e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00780 K01802 - gmx:100500547 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00780 6 9539771 9541143 Pumo6g00780 6 9539771 9541143 ECH