Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00739 ATGGGTCCCTTTACACTGTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATGCTTGTACGAAGAGAAAGCAGAACTTACTTCTGAAAAATTCTTTTGCATCAGTTAGCATGGGAGACGAAAAGCCATTTGACTTCTTACGCACTTTATTTGAGGGTGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACAATAAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAACCTGAGTGCTTTTACTCATTTGACTGCAGGGGCCATAGGGGGCATTGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGGGATTTACCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTCGAATAGGCTATATGCTTGCGGCACGAAGAAATCTTAATGATCCTGAAAATGCAATTATTGGTGCTTTTGCAGGCGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAATATAAGGGAATCGCTGACTGTGTTCAAACCATTATTAAGGAAGAAGGACCTCGTGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTAGGTGTCCTTGA 906 0.4205 MGPFTLSVMVNDSAISLPDACTKRKQNLLLKNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFTHLTAGAIGGIAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIADCVQTIIKEEGPRAFLKGIGPRVLWIGIGGSIFFRCP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00739 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Pumo6g00739 301 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 33 299 - -
Pumo6g00739 301 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Pumo6g00739 301 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Pumo6g00739 301 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Pumo6g00739 301 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Pumo6g00739 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Pumo6g00739 301 Pfam Mitochondrial carrier protein 130 211 IPR018108 -
Pumo6g00739 301 Pfam Mitochondrial carrier protein 225 298 IPR018108 -
Pumo6g00739 301 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Pumo6g00739 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 301 IPR018108 -
Pumo6g00739 301 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 300 - -
Pumo6g00739 301 SUPERFAMILY Mitochondrial carrier 52 298 IPR023395 -
Pumo6g00739 301 Gene3D Mitochondrial carrier domain 41 300 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00739 Pumo-Chr6 9177390 9184101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00739 51 298 Chloroplast and Mitochondria Gene Families AT1G07030 31.502 3.73e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00739 K15111 - gmx:100811130 548.125