Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00737 ATGTCAACAACTTCCCATTCCATTGTTCACCACAGCTTATTCGAGGAGCAGGATCAGATGCCTACACAGATGGGCTTCTTTCCCTTTCCAACAAACCTCACTTTCCCTCCTTTGGGTTGCCATCAATCCTCTTTGAAAGCCTTCAGCTCCATAGCACCTTCTTCACATGCTATATCTCAACAAGATTCTACATCAAATCTAACAGAAACCCTATTCTCAACCACTGCTCAAAAGTCAAGAGAAGACCTCACTTCCAGCTTTGGAGGAGCTCAATTCCTATCCTTGCATAGATCAAGTGTAAATCCATGGGCATTGGGAGAAGTGACTGATTGCTTCAGCAGTAAGAGGAGTGGATTTGATGATCATCATCTCGGAATTTCAGCCATGAAGATGAAGAAAATCAAGACAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACGCAGCACCCCAGAAGCTATTACCGTTGCACACAAGATAATTGTCGTGTGAAGAAACGCGTGGAACGCTTAGCTGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCAAATGATCTCGAAGACTCTCAAACTCAATCTCAACTTGGTAGCTTCTTATGGTAG 702 0.443 MSTTSHSIVHHSLFEEQDQMPTQMGFFPFPTNLTFPPLGCHQSSLKAFSSIAPSSHAISQQDSTSNLTETLFSTTAQKSREDLTSSFGGAQFLSLHRSSVNPWALGEVTDCFSSKRSGFDDHHLGISAMKMKKIKTRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSQLGSFLW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00737 233 MobiDBLite consensus disorder prediction 218 233 - -
Pumo6g00737 233 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00737 233 MobiDBLite consensus disorder prediction 212 233 - -
Pumo6g00737 233 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00737 233 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00737 233 SUPERFAMILY WRKY DNA-binding domain 148 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00737 233 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00737 233 FunFam WRKY transcription factor 57 142 216 - -
Pumo6g00737 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 217 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00737 Pumo-Chr6 9126356 9128857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00737 42 233 WRKY Transcription Factor Family AT4G39410 48.374 1.32e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo6g00737 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00737 - - pvu:PHAVU_002G266400g 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00737 6 9126356 9128857 Pumo6g00737 6 9126356 9128857 ECH