Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00725 ATGGAAAGCAAAACAAAGTACTCGTCGGTCTTGGCTATATGCATGTGCTTGATTTTAGCGCATCACCAAACAGGTGCCGCAGAAGAAAAAATAGGAAAGGAACTAATTGAAAGTATATGCAAAGACAGGGGAAACGATGAACTGTGCATGGAGGTGCTTTCCTCGGACCCAGACAGTGAACACGCAGACCTACAAGACCTGGCAATGATATCACTGAAGGCAGCGGCGTCAAATGCGAGCAACATACTGATCGATTGTAAGAGAATGATTGACAACCCGAATTTGGAGCCTAAGATTCAGCAGGGGTTGGCTGATTGCAAGGAGAACCTTTTGGATGCAGAGGGCCAGATTCAGGACGCTATTGCGTCCATATTGTCCGATGACAAGCTCGATGCTCAAGTGTGGCTCAAGGCCGCCTTAGCTGCAATTGATACATGCGACGATTCCATTCCGGGGGACGACGACATTCTCTCTAGAAAGAGTGTGGCCTTTCGCCAACTCTGCAACATTTCCGTCGCCATCAACAAGGCCATGTTGGCCGAGAGAGAATGA 552 0.4837 MESKTKYSSVLAICMCLILAHHQTGAAEEKIGKELIESICKDRGNDELCMEVLSSDPDSEHADLQDLAMISLKAAASNASNILIDCKRMIDNPNLEPKIQQGLADCKENLLDAEGQIQDAIASILSDDKLDAQVWLKAALAAIDTCDDSIPGDDDILSRKSVAFRQLCNISVAINKAMLAERE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00725 183 NCBIfam pectinesterase inhibitor domain 9 178 IPR006501 GO:0004857
Pumo6g00725 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 179 IPR035513 -
Pumo6g00725 183 CDD PMEI-like_1 35 178 - -
Pumo6g00725 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
Pumo6g00725 183 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Pumo6g00725 183 SMART PMEI_2 31 174 IPR006501 GO:0004857
Pumo6g00725 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00725 Pumo-Chr6 9046635 9047543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00725 24 156 Carbohydrate Esterase AT5G53370 26.429 1.42e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00725 - - gmx:100803408 312.383