Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00711 ATGGCAAAATCTCCAGAAACTGAACTACCCGTCAAAGCCTTTGGTTGGGCTGCTAGAGACACTTCTGGCACCCTTGCCCCCTTTCATTTTTCCAGAAGGGAAAATGGCGTTGATGACGTCACTCTCAAGATTCTCTTTTGCGGGGTTTGCCACTCTGATCTCCACACTCTCAAAAACGACTGGGGTTTCACCACTTACCCTGTCGTTCCAGGGCATGAAATTGTTGGTGTTGTGACAAAAATTGGAAACAATGTGAAAAATTTCAAAGTGGGTGATAAAGTTGGAGTTGGTGTGATAGTGGAGTCTTGCAAGGAATGTGAATGTTGCCAACAGGATCTGGAGAGTTACTGTCCCCGCCCTGTGTTTACCTATAACTCTCCTTATTATGATGGGACACGAACCCAAGGTGGTTATTCTAACATCGTGGTTGTGCACCAGCGTTACGTACTCCGATTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTGCTGTGTGCTGGGATAACTGTGTATAGCCCAATGAAATATTATGGAATGACAGAGCCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGCCAAGGCATTTGGGCTGAAAGTTACTGTCATTAGTAGCTCTCCAAACAAGCAATCTGAGGCCATTGACAAACTTGGGGCTGATTCTTTCCTTGTTTCCTCAGACCCTGCAAAAATGAAGGCTGCTTTGGGAACCCTGGACTATATCATAGACACAATTTCTGCTGTTCATTCCCTGATTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTAGTTACTGTAGGGTTGCCTAACAAGCCCCTTGAGCTGCCTGTCTTTCCCCTAGTTGCAGGACGGAAGCTTATAGGGGGGAGCAACTTTGGAGGGCTCAAGGAAACTCAGGAAATGCTTGATTTCTGCGGAAAGCACAACATAGCTGCAGATATTGAGCTGATTAAGATGGATCAGATCAACACAGCCATGGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCCAACTCTTTCTCAACTTTGTAG 1083 0.4626 MAKSPETELPVKAFGWAARDTSGTLAPFHFSRRENGVDDVTLKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKIGNNVKNFKVGDKVGVGVIVESCKECECCQQDLESYCPRPVFTYNSPYYDGTRTQGGYSNIVVVHQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFAKAFGLKVTVISSSPNKQSEAIDKLGADSFLVSSDPAKMKAALGTLDYIIDTISAVHSLIPLLGLLKLNGKLVTVGLPNKPLELPVFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAADIELIKMDQINTAMERLSKADVKYRFVIDVANSFSTL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00711 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pumo6g00711 360 CDD CAD1 14 352 IPR047109 GO:0016616
Pumo6g00711 360 SUPERFAMILY GroES-like 21 185 IPR011032 -
Pumo6g00711 360 Gene3D - 167 323 - -
Pumo6g00711 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Pumo6g00711 360 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
Pumo6g00711 360 Gene3D - 16 353 - -
Pumo6g00711 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Pumo6g00711 360 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Pumo6g00711 360 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Pumo6g00711 360 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Pumo6g00711 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Pumo6g00711 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00711 Pumo-Chr6 8925201 8928798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00711 12 357 Monolignol Biosynthesis Gene Families AT2G21730 70.690 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00711 K00083 - gmx:100819684 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00711 6 8925201 8928798 Pumo6g00711 6 8925201 8928798 ECH