Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00708 ATGAAGGGAAACAAGCCTTATCTAGTTGTGATCCTCATAGAAGCCATCTACGCTGCCATGTTTCTGCTCTCAAAAGCTGCATTTGACCATGGCATGAACAACTTCATCTTTGTCTTCTATAGGCAGACCGCAGCCACCATATTCCTTATCCCTTTCGCTTTTTTCTTTGAATGGAAAACTGCACCCCCTTTGTCCTTCGTGACCTTCTGTAAGATCTTTTGCCTTTCTTTTCTGGGGATCACTGCGAGCTTGGACATATATGGTATTGGTCTTATTTACACTTCTGCTACTTTGGCTGCTGCTACCACAAACTGCCTTCCAGTCATTACTTTCTTCTTGGCGCTCCTACTCAGGATAGAAAATTTGAAAGTAAAGAGTGCCCCCGGGGTTGCTAAGTTGGTTGGTGTAGTGGCATGCTTGACTGGATCAGCAATCCTAGCTTTCTATAGAGGTCCTCATTTGGAACTTTTAAGCCATTATCACCTTTTAGGGTACCATAAAAACCAACAACATCTGGGTCGTGTTGCATCTGGATCATGGATAAAGGGTTGCTTCCTCTTGCTCCTCTCCAATACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTATGTCATAAAAGGCTACCCTTCAAAGCTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCGATTCAGTCTTTGGGCATTGCCTTGGCTGTAGAAAGAGATATTGAGCAATGGAAGTTGGGGTGGAATGTTAGACTCCTCGCCGTAGTTTATTGTGGAATTATGGTGACTGGTGTAACATATTACTTACAAACATGGGTTATTGAGAAGAAAGGACCGGTGTTTCTAGCCATGGCAACACCACTGGCTTTGATCATGACCATCTTCTCCTCCGCAATTCTCTTGGGAGAGATCATAACTTTGGGAAGCCTTTTAGGTGGCGTCGCTTTGGTTATTGGACTGTACTGCGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCAAAAGCCTCGTTAGACTTGGAGGAGGCATCGGGTTAG 1023 0.4487 MKGNKPYLVVILIEAIYAAMFLLSKAAFDHGMNNFIFVFYRQTAATIFLIPFAFFFEWKTAPPLSFVTFCKIFCLSFLGITASLDIYGIGLIYTSATLAAATTNCLPVITFFLALLLRIENLKVKSAPGVAKLVGVVACLTGSAILAFYRGPHLELLSHYHLLGYHKNQQHLGRVASGSWIKGCFLLLLSNTFWGMWLVLQTYVIKGYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVIEKKGPVFLAMATPLALIMTIFSSAILLGEIITLGSLLGGVALVIGLYCVLWGKSREQMPKASLDLEEASG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00708 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
Pumo6g00708 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Pumo6g00708 340 PANTHER WAT1-RELATED PROTEIN 5 328 IPR030184 GO:0016020|GO:0022857
Pumo6g00708 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Pumo6g00708 340 Pfam EamA-like transporter family 5 131 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00708 Pumo-Chr6 8852910 8858069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00708 1 254 Nodulin-like Gene Family AT5G64700 61.628 5.83e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00708 - - gmx:100796986 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00708 6 8852910 8858069 Pumo10g01628 10 21395754 21400354 PCT