Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00693 ATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCAGTAGCGAGCACCGAGCCACCGCACGCGAGCCACAAGCCTACGAAGCCATTCCTCTTCGCCACCGTTTCTCTCTCTTCACTCCTGCTCACTCTCTCTCTCTTCTTCCTCGAAGCGGAGCCCTTCAAATCGCTCCTCTTCTGGCTCGCACTCTCTCTCCTCCTCGGCCCCTTCGCTCCTCCCTCCCTCACCGGCGGCGACTTCCGCGTCGGCCGCGGCGAGGTCGTCAACTTCCCCGATCCGGAGCCCGAGCCCGACGATGATGCCAGTAGAAAGTCCTCGCAGCGGCGATCCAGACAGCGGAGACCCGAGGAAGTCGCTGGCGTCGGTCCGGTGGTTTCCGTCAGCGCGGCGGAGAAGAGAAGACAAGATTCTGGAATCGAGAAGCGTGTGACTGTGGTGGAGGAGGAGAAGGAGTGGAGCGAGGAGGATATTGAGGTGCTGAAGAAGCAGATGGTGAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGTGATAGCGGCGGCGTTCGGCGGAAGGCACGGAGTGGAGAGTGTGATAAAGAAGGCGAAGGAGTTAGGGGAGAAGAAAGTGGACGATTCGGAGTCGTATGCGTTGTTTTTGAAGAAGAGGAAGGCGTTGGATAAGAGAGTTGTGGAGGAGAATGGGGGTGGTGAGGGTGAGGATTCGGTGGAGAAAGTTGTTGATAATGGTTGGAGTTCTGCTGAGGATATCGCGTTGCTGAATGCTTTGAAAGCGTTTCCTAAGGAAGTTTCGATGAGGTGGGAGAAGGTTGCTGCTGCGGTTCCCGGGAGATCCAAGGCGGCTTGCATGAAGAGATTCGCGGAATTGAAGAAAGGGTTTCGGAGTGCAAAAGCTTCAGCCGAGTGA 921 0.5787 MEFLDEDARPRFVFQSGAVASTEPPHASHKPTKPFLFATVSLSSLLLTLSLFFLEAEPFKSLLFWLALSLLLGPFAPPSLTGGDFRVGRGEVVNFPDPEPEPDDDASRKSSQRRSRQRRPEEVAGVGPVVSVSAAEKRRQDSGIEKRVTVVEEEKEWSEEDIEVLKKQMVKNPVGKPGRWEVIAAAFGGRHGVESVIKKAKELGEKKVDDSESYALFLKKRKALDKRVVEENGGGEGEDSVEKVVDNGWSSAEDIALLNALKAFPKEVSMRWEKVAAAVPGRSKAACMKRFAELKKGFRSAKASAE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00693 306 Pfam Myb-like DNA-binding domain 249 294 IPR001005 -
Pumo6g00693 306 CDD SANT 249 295 IPR001005 -
Pumo6g00693 306 Gene3D - 151 209 - -
Pumo6g00693 306 MobiDBLite consensus disorder prediction 101 121 - -
Pumo6g00693 306 SUPERFAMILY Homeodomain-like 155 194 IPR009057 -
Pumo6g00693 306 SMART sant 245 297 IPR001005 -
Pumo6g00693 306 SMART sant 153 206 IPR001005 -
Pumo6g00693 306 MobiDBLite consensus disorder prediction 91 126 - -
Pumo6g00693 306 SUPERFAMILY Homeodomain-like 245 295 IPR009057 -
Pumo6g00693 306 FunFam Myb family transcription factor 244 303 - -
Pumo6g00693 306 ProSiteProfiles Myb-like domain profile. 249 295 IPR001005 -
Pumo6g00693 306 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 143 304 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pumo6g00693 306 Gene3D - 243 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00693 Pumo-Chr6 8714921 8717125 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo6g00693 Myb_DNA-binding 9.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00693 - - gsj:114413206 442.58