Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00684 ATGGCTTATTATCTTCTCTACCTCTCTCTCTCCCTCATCCTAACCCTCTCCTCCTCCTCCACCACCGCCGAGACGCCGATCCAACAAGCCTGCGCCGTGACGCTCTCCCCGCAGCAATGCGAGTCCTCTCTCTCCCAATCCCACAACCTCTCTTCCAACCCCACCCCTCTCCAAATCCTCCAATCCGCCATGGCCCTCTCCTCCGACAACCTCGCCGCCGCCCAGTCCATGGTCAAGTCCATCCTCGACGCCTCCGTCGACAGCCCCAACCGCACCGTGGCCGTCACTACCTGCACCGAAACACTAGCCAACTGCCAGCACCGCATCTCCCTCTCCACCGACGCGCTCCCACGCGGCAAGACCAAGCACGCGCTCGCCTGGCTCGGCGCCGCCTTCGGGTACCTCCACGACTGCCAAAGCAGCCTCGAGAAGGTCAACGACACCGAACCGGTCCGCAAAACGATGTCCTCCATCGACGCCCTCATCACTCTCTCTACCAATACCCTCAGAATGGCCTTTTCCTTCGACGCCTTCGGAAACGACACCGCCAACTGGAAGCCCCCCACCACCGAGCGCGACGGCTTCTGGGGGACCCCCGCCTCGGGTGGGCCCGGTCCCGTCCCAGGGGTTCCGTCTAATTTGACGCCCGACCTTACCGTCTGTAAGAATGGAGCGAACGGGTGTCAGAAGACGGTGCAGGAGGCCGTTAACGCCGCGCCAGATAACGGCGAAGGTAAGATGTTCGTCATACAAATAAAAGAAGGGGTTTACGAGGAGACCGTTAGGGTTCCGTTAGCGAAGAGGAATGTGGTGTTCTTGGGCGACGGTATGGGCAAGACGGTCATCACCGGCAACGCTAACGTGGGGCAACAAGGGATGACAACTTACAACTCTGCCACCGTCGCGGTTCTTGGGGATGGATTCATGGCAAAGGATTTGACGATCGAAAACAAAGCTGAGTCTCACCAAGCAGTGGCATTCAGATCAGACAGTGACCTTTCTGTGATTGAGAATTGTGAATTCTTAGGCAATCAAGACACTCTTTATCCTCACTCCCTGCGACAGTTTTACAAGTCATGCCGCATCCAGGGCAATGTGGACTTCATCTTTGGAAACGCTGCAGCAGTTTTCCAAGACTGCCAGATCCTAGTTCGTCCCAGGCAAGTGACCCCAGAGAAGGGTGAGAACAATGCTATCACGGCAAATTCCAGGGAAGACCCTGCACAACCCACAGGCTTTGTTTTCCAGAACTGCTCCATTAATGGCACTGAGGAATATATGAAATTGTACCACAGCAAGCCTGAAGTGCACAAGAACTATTTGGGTAGGCCTTGGAGGGAGTTTTCCAGAACGGTTTTCATTAATTCGTTCTTGGAGGTCCTTGTCACACCCCAGGGTTGGATGCCATGGAGTGGTGACGTTGGTCTCAAGACACTTTACTATGGGGAGTTTGAGAACAAAGGTCCTGGCTCTGATTTGTCTCAGAGGGTGCCATGGAGTAGCAAGATCCCTGTCGAGCACGTGTCAGCGTATTCAGTGCAGAATTTCATTCAAGGAAATGATTGGACTCCATCATCTGCTGGTAGCCAAGCAAGTGATCACAGGAAGCTTAGGAGCCATCAGTAA 1626 0.5492 MAYYLLYLSLSLILTLSSSSTTAETPIQQACAVTLSPQQCESSLSQSHNLSSNPTPLQILQSAMALSSDNLAAAQSMVKSILDASVDSPNRTVAVTTCTETLANCQHRISLSTDALPRGKTKHALAWLGAAFGYLHDCQSSLEKVNDTEPVRKTMSSIDALITLSTNTLRMAFSFDAFGNDTANWKPPTTERDGFWGTPASGGPGPVPGVPSNLTPDLTVCKNGANGCQKTVQEAVNAAPDNGEGKMFVIQIKEGVYEETVRVPLAKRNVVFLGDGMGKTVITGNANVGQQGMTTYNSATVAVLGDGFMAKDLTIENKAESHQAVAFRSDSDLSVIENCEFLGNQDTLYPHSLRQFYKSCRIQGNVDFIFGNAAAVFQDCQILVRPRQVTPEKGENNAITANSREDPAQPTGFVFQNCSINGTEEYMKLYHSKPEVHKNYLGRPWREFSRTVFINSFLEVLVTPQGWMPWSGDVGLKTLYYGEFENKGPGSDLSQRVPWSSKIPVEHVSAYSVQNFIQGNDWTPSSAGSQASDHRKLRSHQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00684 541 NCBIfam pectinesterase inhibitor domain 4 163 IPR006501 GO:0004857
Pumo6g00684 541 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 172 IPR035513 -
Pumo6g00684 541 SMART PMEI_2 22 171 IPR006501 GO:0004857
Pumo6g00684 541 Pfam Pectinesterase 217 520 IPR000070 GO:0030599|GO:0042545
Pumo6g00684 541 Gene3D - 211 531 IPR012334 -
Pumo6g00684 541 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 162 IPR035513 -
Pumo6g00684 541 SUPERFAMILY Pectin lyase-like 215 525 IPR011050 -
Pumo6g00684 541 MobiDBLite consensus disorder prediction 522 541 - -
Pumo6g00684 541 FunFam Probable pectinesterase/pectinesterase inhibitor 51 25 174 - -
Pumo6g00684 541 FunFam Pectinesterase 4 214 532 - -
Pumo6g00684 541 CDD PMEI-like_3 30 169 - -
Pumo6g00684 541 PANTHER PECTINESTERASE 15 524 - -
Pumo6g00684 541 Pfam Plant invertase/pectin methylesterase inhibitor 27 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00684 Pumo-Chr6 8593741 8595604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00684 18 527 Carbohydrate Esterase AT5G09760 60.348 0.0 633