Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00671 ATGCCGGCTTGGTGGAATAGAAAGTGGAGCAAGAGCAAGGAGGAGCACGAGGAGCCCGAAGAGGATGAGGAGGAAGAGCCACGTGGCGCTTTTCAATTGAATTTCATGAAATCTCCGGTTACCAATAGGAGCGGTGACCGGGAAAAGAACAAGAGTAAGAGCAGTAAGAAGAAGAAGCCGAAGAGCTTCGACGAGAAGGTGAAGGGGGTTCCGTTACCTCGTCCGACGCAGAGTCAGAGCGATCAAATTCAAACGTTTGGATCTGTCTCGGTGTCGGGTTCCAGCGTCAGCTCCTCCACCTCCTTCGACGATCATCCAATTTCGCCGCAGTTTAATGCCAACAGAGGACAAGATGAGGTGAGGTTCAATGCGAGGTCAAAAAGTCCAGGTCCTGGGTCAAGAGGACCTACCAGTCCTACCTCACCGCTTCATCCAAGGTCGCGTGCTTTCAGTCTTGACTCTCCTACAGGGAGTGAGTGTCATCCATTGCCTCTTCCTCCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAACACACAAACAAATGGACTGTTGGAAAACACTACCAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTATATATGGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAACCAGCTTTCACACCATAATATTGTTCAATACTACGGGAGTGAACTGGTAGAAGAATCACTTTCTGTATATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAGTATGGTGCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAATACAGTACACAGGGATATTAAAGGGGCGAACATACTAGTTGATCCTAATGGTGAAATCAAACTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTGTCTCGATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCAAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCCGAGTATCTTTCGAATGATGCAAAGAATTTCATCAAGCTATGCTTACAAAGAGACCCATTAGTTCGCCCGACAGCCCAAAAGTTACTAGACCACCCCTTCATTCGAGATCAATCAGCAACAAAAGCTGCAAATGTCAGCATAACCAGAGATGCTTTCCCTTACATGTTTGATGGAAGCCGGACACCGCCTATGTTAGAGTCCCATTCCAACCGAACTAGTATAACTTCGCTTGACGGAGATTATGCATCAAAGCCAGCTCTTGCAGCTCCACGTGCATTAAGGAGTCCAAGAGATAACACAAGAATGATCACATCTTTACCAGTATCTCCTTCTTCAAGTCCATTGCGACAGTACAGGCCAACGCATCAGAGCTGTTTTTTTTCTCCTCCTCATCCATCTTACACAACAATGGGACAAAGTGGTTACACTTTGAATGACATATCCTCTTATCCAGTGAGATCAAATGCCACGTTCGCTCTTGATCCTTGGCATGAAACATCTCGATACAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA 1809 0.4444 MPAWWNRKWSKSKEEHEEPEEDEEEEPRGAFQLNFMKSPVTNRSGDREKNKSKSSKKKKPKSFDEKVKGVPLPRPTQSQSDQIQTFGSVSVSGSSVSSSTSFDDHPISPQFNANRGQDEVRFNARSKSPGPGSRGPTSPTSPLHPRSRAFSLDSPTGSECHPLPLPPGSPTSPSSVLSNTQTNGLLENTTSNVSKWRKGKLLGRGTFGHVYMGFNSENGQMCAIKEVRVVSDDQTSRECLKQLNQEINLLNQLSHHNIVQYYGSELVEESLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSVSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEYLSNDAKNFIKLCLQRDPLVRPTAQKLLDHPFIRDQSATKAANVSITRDAFPYMFDGSRTPPMLESHSNRTSITSLDGDYASKPALAAPRALRSPRDNTRMITSLPVSPSSSPLRQYRPTHQSCFFSPPHPSYTTMGQSGYTLNDISSYPVRSNATFALDPWHETSRYKANTPPGGSPRMRLI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00671 602 FunFam Mitogen-activated protein kinase kinase kinase 194 476 - -
Pumo6g00671 602 MobiDBLite consensus disorder prediction 172 190 - -
Pumo6g00671 602 MobiDBLite consensus disorder prediction 73 119 - -
Pumo6g00671 602 MobiDBLite consensus disorder prediction 130 154 - -
Pumo6g00671 602 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 43 460 - -
Pumo6g00671 602 Pfam Protein kinase domain 197 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00671 602 Gene3D Transferase(Phosphotransferase) domain 1 193 473 - -
Pumo6g00671 602 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524
Pumo6g00671 602 SMART serkin_6 196 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00671 602 SUPERFAMILY Protein kinase-like (PK-like) 194 539 IPR011009 -
Pumo6g00671 602 MobiDBLite consensus disorder prediction 1 190 - -
Pumo6g00671 602 CDD STKc_MEKK1_plant 195 452 - -
Pumo6g00671 602 ProSiteProfiles Protein kinase domain profile. 196 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00671 Pumo-Chr6 8426944 8432638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00671 1 515 MAP Kinase Kinase Kinase AT1G53570 57.407 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo6g00671 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00671 K04421 - gmx:100787064 964.911