Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00662 ATGATGCAAGATTGTGAGGTTGAGGCCATTGGCATAAACTACACGATCCACACACACAAATCGGAGCACCCTTTTAAAATCTTCAGCAAATCTGCACAACTTGACACTGAACAAGATGGTAAAGAGCCAGAAGAGGAAGAAGAAGCAAAAGCTGAACAAAGTTGCAGTGGAGTAAGGCATGTGCTGAAGAATGTGAGTTTCCAAGCCAAGCCATGGGAGATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGCAAATCATCACTGCTTGAGATTCTTGCTGGTAAACATAGCCCCCAAAGTGGGACTGTGTTTCTGAACCACAAGCCTGTAGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTTACACAAAAGGACACTTTGTTTCCTTTACTTACAGTTGAAGAAACCCTGATGTTTAGTGCAAAGCTGAGGCTGAAACTTTCTCAAGAGCAACTTTGCTCCAGGGTCAAGTCACTGATTCAGGAGCTTGGACTTGACCATGTTGCTGGCACTAGAATTGGTGATGATAGGGTCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATTCATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGATATGCTTAAGGTCATGGCTGACACAAGAGGGAGAACTATAATCCTTAGCATCCACCAACCCGGGTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGCTGTTGGCCAATGGAAGTGTTCTGCACCATGGAACTGCTGATTTGCTTGGTGTGAATCTAAGGCTGATGGGTTTGGAGCTTCCTCTTCATGTCAATGTGGTTGAATTTGCCATTGAGTCCATTGATACCATTCAGCAACAACAGAAATATGTGCCAGTTCAGGTAGAAACTCCAAGGCAACTACCAGGGACAATGCAACAGAAGAAAGGTGATGGTGAAGCAGGTGAGGGTAGGAATGGTAAGTTCACTTTGCAACAGCTCTTTCAGCAATCCAAGGTAATTGATGAAGAAATCATGTATGCTGGAATGGATTTCACTTGTGACTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAGAACATATTCCGTACAAAAGAGCTATTTGCATGCAGGACAGTTCAGATGCTGGTTTCTGGTCTTGTTGTGGGGTCCATCTTTTGTAACCTTAAGGATGATCTAGTGGGAGCTTACGAAAGGGTGGGTCTATTTGCTTTCATATTAACGTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCTTGTGGAAGCTATCGTGTGTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTAGGGCTCAACCGGAATTTCTTGGCGTTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTGTTCTCTGGATACTTCATATCAAAGCAGGAAATTCCAAATTACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGTTCCTGATCAATGAGTTCTCCAACTCGGGGAAGTGCTTGGAGTACATGTTTGGAGCATGTATCAAGAGCGGAGAGGATGTGCTTAAAGAAGAAGGGTATGGAGGGGAGAGTAATAGATGGAAGAATGTTGGGGTCACTGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGTTCCCAGAGAGGGTTTGGCAGGGTTGTCACCAACTAA 1950 0.4287 MMQDCEVEAIGINYTIHTHKSEHPFKIFSKSAQLDTEQDGKEPEEEEEAKAEQSCSGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEQLCSRVKSLIQELGLDHVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKYVPVQVETPRQLPGTMQQKKGDGEAGEGRNGKFTLQQLFQQSKVIDEEIMYAGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTVQMLVSGLVVGSIFCNLKDDLVGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACIKSGEDVLKEEGYGGESNRWKNVGVTVCFILVYRFISYVILRYRCSQRGFGRVVTN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00662 649 FunFam ABC transporter G family member 5 47 307 - -
Pumo6g00662 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 283 IPR003439 GO:0005524
Pumo6g00662 649 Pfam ABC-2 type transporter 371 579 IPR013525 GO:0016020|GO:0140359
Pumo6g00662 649 Pfam ABC transporter 62 210 IPR003439 GO:0005524
Pumo6g00662 649 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
Pumo6g00662 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 629 - -
Pumo6g00662 649 CDD ABCG_EPDR 56 265 - -
Pumo6g00662 649 Gene3D - 48 310 IPR027417 -
Pumo6g00662 649 MobiDBLite consensus disorder prediction 33 53 - -
Pumo6g00662 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 269 IPR027417 -
Pumo6g00662 649 SMART AAA_5 71 260 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00662 Pumo-Chr6 8326608 8329032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00662 61 294 Calmodulin-binding Proteins AT2G36910 27.236 1.06e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00662 K05681 - gmx:102665974 1192.56