Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00634 ATGTTTGTGGTTCCTTGCAATTGCACCCACACCACTGAAAAAGAAAAGTGTGGGGGTGAAAGTGAGAGCTTTCACAAGTTTTTTAAGTGCTGGATTTCTGAGCAAAACCAACATCTGAAGGACCTTTTAGCTGCTGAATCAACTCAGCTCAGAGATGAGGAGCTTCAGGCACTGAATGATAGGGTGGTGGAGCATTATGAATATTACTACAAGGCCAAGTCAAGATGTGCAAAGCAAGATGTGTTGGCCATGTTGTCCCCAACATGGATGAGTTCCTTGGAAGAGGCTTTTCTTTGGATTGGTGGATGGAGACCAAGCATGGCATTTCACTTGCTATATTCCAAGTCAGGCTTGCAATTTGAGGCCAGGCTCAGTGAACTCATCCAGGGTCTAAGAACACATGATTTGGGGGACCTATCATCATCCCAACTTTCTCAGCTTGATGAGATGCAAAGGAGGACCATCTTAGAGGAGAGGGAGATCACAGATTTGATGGCAAGGCACCAGGAGACAGTGGCTGATGCCTCCATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATTAGAGCCAATGAAAGAGGAGAGGTTGATGAGAGTAAGGAAATAGAGGACAAGGTTGAATCAACTCTGGTGCCTAAGGAGGAGGGTTTGGAGAAGATCCTGCTGAAAGCTGATGAGCTAAGGCAAAGAACACTGAAGGATATTGTTGATGTTCTGACTCCAAAACAGGCCATTCACTTCTTAATTGCTGCTGCAGAGCTGCACCTGAGGCTGCATGAGTGGGGCAAAAAGATGGGATGCAAGAAAATGCAATCAAGGTTTTGGTGA 828 0.4577 MFVVPCNCTHTTEKEKCGGESESFHKFFKCWISEQNQHLKDLLAAESTQLRDEELQALNDRVVEHYEYYYKAKSRCAKQDVLAMLSPTWMSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARLSELIQGLRTHDLGDLSSSQLSQLDEMQRRTILEEREITDLMARHQETVADASMVELSHVVSEMIRANERGEVDESKEIEDKVESTLVPKEEGLEKILLKADELRQRTLKDIVDVLTPKQAIHFLIAAAELHLRLHEWGKKMGCKKMQSRFW 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00634 275 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 22 268 - -
Pumo6g00634 275 Pfam Seed dormancy control 38 114 IPR025422 GO:0006351|GO:0043565
Pumo6g00634 275 ProSiteProfiles DOG1 domain profile. 21 268 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00634 Pumo-Chr6 8039548 8040464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00634 17 258 bZIP Transcription Factor Family AT5G06960 26.033 3.87e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00634 - - gmx:100784399 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00634 6 8039548 8040464 Pumo6g00634 6 8039548 8040464 ECH