Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00633 ATGAAATTATTAGGCATCATAGGGACAAACTCAACCATTCCATTAATCAGTACACTGTCAAGTCTTTGCTCTGGCAAGTTGCTCAATGGATTAAGCTATCTGCACAGTAATTGGATGATACATCGAGATTTGAAGCCGTCAAATATATTGGTTATGGGTGAAGGAGAGGAACATGGAGTTGTCAAGATTGCTGACTTTGGACTTGCGAGGATATATCAAGCTCCTCTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCGCTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCCTTTCAGCTTGACCAACTTGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAGTCTTCCACATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGACAACACCAGTCTCTATAATGTTGTACACCTATCTCCAAAAAGTCCTGCATATGACCTCTTGTCAAAGATGCTTGAATATGATCCTCGTAAGCGTATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCACTCGTACCCTGCCAACTTGGAGAGAAAATTGTAAATTATCCCACCCGTCCAGTGGACACCACAACTGATCTTGAAGGAACAACCAATCTGCCACCTTCACAAACGGTAAATGCAGTTTCTGGCAGCATGCCTGGTGCTCATGGGTCAAATAGATCTGTGCCTCGGCCAATGAATGTTGTTGGAATGCAAAGAATGCCACCTCAGGCAATGGCAGCTTATAATCTCACATCTCAGGCAGCCATGGGAGATGGAATGAATCCTGGGGGTATCTCAAAGCAACGAGGTGTTCCACAGGCCCATCAGCCGCAACAGTTGAGAAGGAAAGAGCAAATGGGGATGCCGGGATACCCTGCACAACAGAAGTCAAGACGATTATAA 1074 0.4385 MKLLGIIGTNSTIPLISTLSSLCSGKLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLGHPTLEKWPSLASLPHWQQDVQHIQGHKYDNTSLYNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDTTTDLEGTTNLPPSQTVNAVSGSMPGAHGSNRSVPRPMNVVGMQRMPPQAMAAYNLTSQAAMGDGMNPGGISKQRGVPQAHQPQQLRRKEQMGMPGYPAQQKSRRL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00633 357 Gene3D Transferase(Phosphotransferase) domain 1 21 238 - -
Pumo6g00633 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Pumo6g00633 357 MobiDBLite consensus disorder prediction 311 357 - -
Pumo6g00633 357 Pfam Protein kinase domain 26 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00633 357 PANTHER CELL DIVISION PROTEIN KINASE 26 228 - -
Pumo6g00633 357 FunFam Putative cyclin-dependent kinase E-1 10 235 - -
Pumo6g00633 357 SUPERFAMILY Protein kinase-like (PK-like) 26 223 IPR011009 -
Pumo6g00633 357 SMART serkin_6 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g00633 357 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00633 Pumo-Chr6 8018456 8030813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00633 26 357 Core Cell Cycle Gene Families AT5G63610 73.669 8.09e-178 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Pumo6g00633 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00633 K02208 - gmx:100807993 669.463