Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00626 ATGATGAGGCGAAAGGGTGTGGGAATAACGGGAGTGAAGAGTTGGATGGTGGTGTCGGAGACAGGAGAGGCACGTCTAGAGGATGTTGGGAAGTACGCCATAATGCGGCGAACTGGTTTGCCGGCGCGTGACCTTAGAGTCCTCGATCCCATGTTGTCTCACCCTTCTTCCATCCTAGGACGTGAAAGAGCCATTGTTGTTAACTTGGAACACGTCAAAGCAATCATTACTGCCACCGAGGTCCTCATGATCAACTCCTCCAACCCTTTCTTTCTTCGCTTCCTTCAAGACCTTCACACCCGTCTTACTGATCAAACTCCCACTCCCTCCCCGATGAGCAATGAGATGGATGAAGCAAAACCTCTAGCGGTGGGATCGGCTTCGTTGCGTGGTGGTGAAGATTCCCAAAACGGTTTGCCTGAGGACTCTGATGCGTGTCAAGTAAGAGCGGACAGCCCTAAGATCAGAGCAGAGATGGCACCAGGTCCTAAGCAGTTACCTTTTGAGTTCCGAGCACTCGAGACATGTATTGAATCTGCTTGCAGGTGCCTTGAATCTGAGACTTCAAAATTGGAGGAAGAGGCTTACCCAGCTTTAGATGAATTGACCTCTCAACTTAGCACACTCAATCTTGAACGTGTAAGACAGATCAAGAGTCGTTTGGTTGCACTTTCTGGTCGTGTGCAGAAGGTAGCAGATGAACTGGAACATTTGCTGGACGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTTAATGCTGGTTTAGTGGATCGGGCGTCATTAAAAGAAGAGTACAATTCTGAATCTGAAGATAACGATCAAAGTGATGAATCAAATTCGGAAAAGTTTGACAAATTCCCTGTTGTTAAACTTGACGTTGAGGAATTGGAGATGCTTCTAGAAGCATATTTTGCGCAGACAAATGGAATCTTGCAAAGATTGTCTAGTTTGAGTGAGTACGTGGATGACACGGAGGACTACATCAACATAATGTTGGATGATAAGAGAAATGAGCTTCTGCAGGTAGCAATAATATTCAACACCCTAAACATGATACTTAATGCTGGTATTGTGGTTGTAGGATTGTTTGGCATGAATATTACAATCGAACTCTTTAATGGCGCACCTCGTCAATTTTGGGCTGCCACTGCCGCTCTCAAGGGCATTGTGGTTTCCTCAACCCAGTGCAAACCCAGAGTCCGGTGTGACAAAGAAGTAGGAAATGGTAATAATAACGGGATAGAAGAAGATGGAGAAGAAAAGGAGGAGGAGGGTGAACGTGAGGTGCAGTGTGAGGTTCAAGTGATTTCTTGGAGGGAAAGGAGAGTTAAGGCCGAAATTTCTGTCAATGCTGACATTGAATCCGTTTGGAACGCTCTCACTGATTATGAGCATCTCGCTGATTTCATTCCAAATCTTGTGTGGAGTGGGAAAATTCCTTGCCCATATCCTGGACGGATATGGTTAGAGCAAAGAGGATTTCAAAGGTCAATGTATTGGCACATAGAAGCTCGTGTTGTGTTGGATCTTCAAGAATTCATCAATTCTGCATGGGATCGAGAACTTCACTTTTCCATGGTTGATGGAGACTTTAAGAAGTTTGAGGGCAAATGGTCTGTAAAATCTGGAACAAGATCTTCATCAACTAATTTATCTTATGAAGTTAATGTTATACCAAGATTCAATTTCCCAGCTATTTTCTTGGAAAGGATTATCAGATCAGATCTCCCTGTGAACCTCCGAGCCTTGGCATATAGAGTTGAGAGGAATATTTCAGGAAATCATAAACTTTCCCTGCAAGAAAATCACTTGGATAAAACTTCTAGTGATATTTATAGGTCATCTACCCAAAAGATAAATAGTGCTTTGTGTGAAAATAACAAGTTGTCACCTGGAGAAAACAAAGAAGATTTAGTCAGCTCAATTTCTGGTTCCTTGCCCGTGTCTTCCAGTGAGGTGAACATCAATAATTGGGGTGCATTTGGAAAAACTTGCAGACTTGACAGGCCTTGTGTAGTGGATGAAATTCATCTCCGTAGATTTGATGGACTTTTGGAAAATGGAGGTGTTCATCGCTGTGTTTTTGCAAGCATAACAGTTAAAGCTCCTGTTCGTGATGTATGGAATGTCATGTCTTCCTATGAGACTCTTCCTGAGATAGTTCCAAATTTAGCAATCAGTAAGATTCTATCACGAGATAACAATAAAGTCCGCATTCTCCAGGAAGGGTGTAAGGGCCTGCTTTATATGGTGCTTCATGCTCGTGTTGTGCTAGACTTGTGTGAATATCTAGAACAGGAGATCAGTTTTGAACAGGTTGAAGGGGACTTTGACTCATTCCAGGGAAAGTGGACTTTTGAGCAACTAGGAAATCATCACACACTGCTAAAGTACTCTGTGGAGTCAAAAATGCGCAAAGACACTTTCCTTTCTGAAGCTATCATGGAAGAGGTCATTTATGAAGATCTCCCATCAAATTTGTGTGCAATAAGAGATTATATTGAGAACAAGACAGCATCAAATATTTTGGAAGCATGTAAGCAGAATACAAATTCAGGGCAACAAACTGTTCCATCTGGCTTTGAAGATGATGACAGCTATTGTTCAGCTGAAGACTTGTCTGATTGCAATGCTGAAAGCTCATCTCAACAAAGACCAAGAGTTCCAGGCTTACAAAGGGATATTGAAGTCCTAAAATCTGAACTCCTTAAATTCATTGCAGAACATGGACAAGAAGGATTTATGCCAATGAGGAAGCAAATTCGTTTGCATGGAAGAGTGGATATTGAGAAGGCTATAAATCGCATGGGTGGATTCAGAAAGATTGCACTTATAATGAACCTCTCTCTGGCTTACAAACACCGCAAACCAAAGGGTTACTGGGACAATCTTGAAAATTTGCATGATGAGATAAGTAGATTTCAAAGGAGCTGGGGAATGGACCCTTCATTTATGCCTAGCAGAAAGTCATTTGAACGTGCAGGGCGCTTTGATATAGCACGTGCACTGGAAAAATGGGGTGGACTTCGTCAGGTTTCTCGCCTTCTGTCGCTCAAGGTGAGGAGACAACGAAGCAGACGGGGCAACCTTGCCAAGGATAAGAAAGTTGATGAAGATGTAGCATCACCTGATGTAGATAGTGAGATCAAGACACCATCTAGACCCACTGTTTCTCAAGATCCACAAAAATGGCTTACAGAACTAAAACAGTTGGACATAAATTGGGTTGAGTAA 3243 0.4265 MMRRKGVGITGVKSWMVVSETGEARLEDVGKYAIMRRTGLPARDLRVLDPMLSHPSSILGRERAIVVNLEHVKAIITATEVLMINSSNPFFLRFLQDLHTRLTDQTPTPSPMSNEMDEAKPLAVGSASLRGGEDSQNGLPEDSDACQVRADSPKIRAEMAPGPKQLPFEFRALETCIESACRCLESETSKLEEEAYPALDELTSQLSTLNLERVRQIKSRLVALSGRVQKVADELEHLLDDDNDMAEMYLTQKLNAGLVDRASLKEEYNSESEDNDQSDESNSEKFDKFPVVKLDVEELEMLLEAYFAQTNGILQRLSSLSEYVDDTEDYINIMLDDKRNELLQVAIIFNTLNMILNAGIVVVGLFGMNITIELFNGAPRQFWAATAALKGIVVSSTQCKPRVRCDKEVGNGNNNGIEEDGEEKEEEGEREVQCEVQVISWRERRVKAEISVNADIESVWNALTDYEHLADFIPNLVWSGKIPCPYPGRIWLEQRGFQRSMYWHIEARVVLDLQEFINSAWDRELHFSMVDGDFKKFEGKWSVKSGTRSSSTNLSYEVNVIPRFNFPAIFLERIIRSDLPVNLRALAYRVERNISGNHKLSLQENHLDKTSSDIYRSSTQKINSALCENNKLSPGENKEDLVSSISGSLPVSSSEVNINNWGAFGKTCRLDRPCVVDEIHLRRFDGLLENGGVHRCVFASITVKAPVRDVWNVMSSYETLPEIVPNLAISKILSRDNNKVRILQEGCKGLLYMVLHARVVLDLCEYLEQEISFEQVEGDFDSFQGKWTFEQLGNHHTLLKYSVESKMRKDTFLSEAIMEEVIYEDLPSNLCAIRDYIENKTASNILEACKQNTNSGQQTVPSGFEDDDSYCSAEDLSDCNAESSSQQRPRVPGLQRDIEVLKSELLKFIAEHGQEGFMPMRKQIRLHGRVDIEKAINRMGGFRKIALIMNLSLAYKHRKPKGYWDNLENLHDEISRFQRSWGMDPSFMPSRKSFERAGRFDIARALEKWGGLRQVSRLLSLKVRRQRSRRGNLAKDKKVDEDVASPDVDSEIKTPSRPTVSQDPQKWLTELKQLDINWVE 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00626 1080 CDD SRPBCC_11 697 838 - -
Pumo6g00626 1080 FunFam Magnesium transporter MRS2-E 116 342 - -
Pumo6g00626 1080 MobiDBLite consensus disorder prediction 1033 1048 - -
Pumo6g00626 1080 SUPERFAMILY Bet v1-like 700 839 - -
Pumo6g00626 1080 MobiDBLite consensus disorder prediction 409 429 - -
Pumo6g00626 1080 Pfam Polyketide cyclase / dehydrase and lipid transport 703 834 IPR005031 -
Pumo6g00626 1080 Pfam Polyketide cyclase / dehydrase and lipid transport 452 586 IPR005031 -
Pumo6g00626 1080 Gene3D - 445 595 IPR023393 -
Pumo6g00626 1080 SUPERFAMILY Bet v1-like 445 593 - -
Pumo6g00626 1080 CDD SRPBCC_11 446 592 - -
Pumo6g00626 1080 Gene3D Magnesium transport protein CorA, transmembrane region 127 342 - -
Pumo6g00626 1080 Gene3D - 689 846 IPR023393 -
Pumo6g00626 1080 CDD Mrs2_Mfm1p-like 15 396 IPR039204 -
Pumo6g00626 1080 MobiDBLite consensus disorder prediction 1030 1065 - -
Pumo6g00626 1080 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN 430 977 - -
Pumo6g00626 1080 Gene3D - 9 87 - -
Pumo6g00626 1080 FunFam Magnesium transporter MRS2-1 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00626 Pumo-Chr6 7960943 7969275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00626 14 393 MRS2 Gene Family AT3G19640 47.307 7.30e-112 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00626 - - gmx:100797103 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00626 6 7960943 7969275 Pumo6g00626 6 7960943 7969275 ECH