Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00623 ATGAAGGTGAAGAAGGGTTGGCTCGCGGTTCAAGTGGAAGAGGAATCAGAAGAGGGTTGTGGTGGTGGCTCTCAAAGATTTGTGGTCCCAATTTCGTACCTTTATCACCCTCTTTTCAAGCACCTTCTGGACAAGGCTTATGAGGTTTATGGCTACCACACGGAGGGTCCTCTTAAGCTCCCATGTTCAGTTGATGATTTTCTCCATCTCCGGTGGAGAATCGAGAAAGAATCCGCTACCCATCATCAACATCATCATCACCATCATCATCATCATCGCCAACTTCCTCACGCCTTGTATTTCCACGCTTGTTAA 315 0.4698 MKVKKGWLAVQVEEESEEGCGGGSQRFVVPISYLYHPLFKHLLDKAYEVYGYHTEGPLKLPCSVDDFLHLRWRIEKESATHHQHHHHHHHHHRQLPHALYFHAC 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00623 104 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
Pumo6g00623 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00623 Pumo-Chr6 7923984 7924873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00623 3 95 Calmodulin-binding Proteins AT5G20810 37.634 4.31e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00623 K14488 - gmx:100306557 186.808