Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00603 ATGGGTCATTTGGGTGTTTGTCATCAAGTCAGGTTCATTGGTCAGCATGAGGAATATGGAGGTAGACTTTCTTCCAGTATTCCTACAGTAGAGGGATCAAAAGATAAAGAAAAAATCATTAAAGTTAAACCTATCTTCATGCCAAAATTTAAGAAAAGAAAACGCCTTAGCCTTAATCGTCTTAGAGAGATTAAAGCAGATATGTGTGAGAGACAAAGTAGTGACATGCCTAAAACAAAGAAGTGTGAAAGCAGAGACAGATGGTCAGCTAAGAGGTATGAGTTGGCTCAGCAAAGCATGTGGGAGGTCTTAAAAGGTGAAGGTGCAACTTTTGAAAATCCAATAACCCGACCTGCACTAAGAATGGCTGCCCGTAAACACATTGGTGATACTGGACTATTAGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGAACTGAGCGGTTCCGACGATGTTTTAACACCAAGGGAATCATGGAGTATTGGTTGGAGAGTGCTAATTTGGATGAGATCCGCCAGGAGACTGGGGTGCAAGACCCTTACTGGATACCACCGTCTACATTTAGGGCAGGCAGTGTTCCTACTCAAAATATGGATTCTGTTGATGAACTGAAAATGCTTAAAATAGAAATGGCCCAGATGAAGAAAGACATGCAAGAGCTCATTGCCAAGAAGCAAGAAAAAAGTGAAATGTGTTTGATGGAGGAGACACAGAAAAGTTTTGTGAATTGGAAAGCTATGACTGAGCAGCGTGTAACTGAGATTATGACTTCTTTGAAGGGTGTCCAGGCCATGCATGAAAACATGTTGATTTGGAAAACTAACGTTGAGAAACAGCTAATGGAAATAACCAATAAATTGAGTGATGTACAAACATTGAGAGAACACACCACTTCAAGTTATCCTCCAGTAGGCTGGGAGGATTGGCTAGAAAGCACCAATCCTAGACAATATTCAGGGAAACGAACTTGCGCCTTGGTTTGGGAATCCTGA 1005 0.4159 MGHLGVCHQVRFIGQHEEYGGRLSSSIPTVEGSKDKEKIIKVKPIFMPKFKKRKRLSLNRLREIKADMCERQSSDMPKTKKCESRDRWSAKRYELAQQSMWEVLKGEGATFENPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRCFNTKGIMEYWLESANLDEIRQETGVQDPYWIPPSTFRAGSVPTQNMDSVDELKMLKIEMAQMKKDMQELIAKKQEKSEMCLMEETQKSFVNWKAMTEQRVTEIMTSLKGVQAMHENMLIWKTNVEKQLMEITNKLSDVQTLREHTTSSYPPVGWEDWLESTNPRQYSGKRTCALVWES 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00603 334 Coils Coil 208 235 - -
Pumo6g00603 334 PANTHER PROTEIN DYAD 5 325 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00603 Pumo-Chr6 7573123 7574693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00603 87 168 PHD Transcription Factor Family AT5G22260 42.169 1.75e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00603 - - gmx:100792586 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00603 6 7573123 7574693 Pumo6g00603 6 7573123 7574693 ECH