Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00574 ATGGCACAAGATTCAGAGAAAATTTGTGAAGGTGCTTCCGAGTCTCCAACCACCCCAGTTGGAAGACAAGCAGCACCTGCAGAGAGTGAACCCAAAAGTACCCCTCAGAGAATCAAAGCCACGAGGCACCCCAGATGGACTAGACCAGAAACACTTGTTCTCATAGAGTCCAAGAAAATGGTGGAAAATGGGGAACAAGTGTGCCGATTCAGATCAGCATCAGGGTACGTTCAAACCGATCCAAAGTGGGACACGGTGTCATCACTGTGCCAGCAGAGAGGGGTGAAGAGAGGGGCTGTTCAGTGCAGGAAAAGGTGGGGCAATCTTCTCACTGATTTCAGGAAGATCAAGAAGTGGGAAAGTGGCATAAAGGAGGAGAGTGAGTCGTTTTGGATCATGAGGAATGATGTGAGGAAGGAGAAGAAGTTGCCGGGGTTCTTTGACTCTGTGGTGTATAATGTGCTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTCAAGATGGTGCCAAAGGTGGAGAATGGTGTTGTTGTTGAGGGAGTGGTTCATCAGGAACAGTGTAATAAGGAGAATAATGAGGAGGAAGAGGAGGAGGAGGAGGAAGATGAGGCTATTGTTGATGGTGAGAAGATGGGGTGGAGCACTGAGGAGGAAAACATGGAGACTAACATCACTGGAAATAACTATGGTCAATGGTTTTCTGAAAACACCAACAGGTCTTATTAA 738 0.4783 MAQDSEKICEGASESPTTPVGRQAAPAESEPKSTPQRIKATRHPRWTRPETLVLIESKKMVENGEQVCRFRSASGYVQTDPKWDTVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGIKEESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKVENGVVVEGVVHQEQCNKENNEEEEEEEEEDEAIVDGEKMGWSTEEENMETNITGNNYGQWFSENTNRSY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00574 245 Coils Coil 186 211 - -
Pumo6g00574 245 MobiDBLite consensus disorder prediction 226 245 - -
Pumo6g00574 245 Pfam Myb/SANT-like DNA-binding domain 44 133 IPR044822 -
Pumo6g00574 245 Gene3D - 46 115 - -
Pumo6g00574 245 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 26 226 - -
Pumo6g00574 245 MobiDBLite consensus disorder prediction 1 45 - -
Pumo6g00574 245 ProSiteProfiles Myb-like domain profile. 45 110 IPR001005 -
Pumo6g00574 245 MobiDBLite consensus disorder prediction 190 214 - -
Pumo6g00574 245 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00574 Pumo-Chr6 7235430 7236167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00574 45 134 Trihelix Transcription Factor Family AT5G03680 29.670 3.45e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00574 - - gmx:100793052 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00574 6 7235430 7236167 Pumo6g00574 6 7235430 7236167 ECH