Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00564 ATGACGAACTTGCCAACATGGAAAACCATGGCAATGACTGTGGTATTGCTTCAGCTGAGCTTTTCCTTGGAGATTTACTGTCTCTCTTATCATGCAGATAGAATTGTTCGGCTTCCCAGGCAGCCCAACATAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACATGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCAAATGGAGAAGTTCTGATTAAAAACGAGTACAGTTGGAACACAGAAACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATACAAACATAGAGATTTGTTTCTAGCAGGTGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCCGAGTTCTTCTGGTCTCACGGATTGATATCAGATTCAACGTACAAATTGTTCACTACGAGTTGTAATTATTCGCGGTATGTCAGTGAATACTATAGAGACTCAATTTCGCCACTTTGTTCAAAGGTTATGAGGCATGTAAGCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACGCTTGATGTTTGCATTTCCTCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAACAAACAAATGAGAGCATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAAAGATGTTCGAGAGGCACTCCATGCCAAGCTTGTTGGAGTTCGAAAGTGGGATGTTTGCAGCAACATTCTGGAGTATGATATGCTCAACCTGGAGGTACCAACACTCCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTAGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTTACTGGAAGCCGCACCTTGGTTCAAAAGCTTGCTAGACAACTAAGACTGAATACAACAATCCCTTATAGAGTATGGTTTGAGGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTCGTTTTGTTCAAGTCATTCTTGGAAGATAGGCCCCTACCTGAAATTTTCTGA 1401 0.4211 MTNLPTWKTMAMTVVLLQLSFSLEIYCLSYHADRIVRLPRQPNIGFQQFSGYVTVDDMKHKALFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNTETNMLYLETPVGVGFSYAKGGSSYETVNDETTARDNLVFLQRWFNKFPQYKHRDLFLAGESYAGHYVPQLAKLMIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKLFTTSCNYSRYVSEYYRDSISPLCSKVMRHVSRETSKFVDKYDVTLDVCISSVLSQSKAICPQGQQTNESIDVCVDDKVTNYLNRKDVREALHAKLVGVRKWDVCSNILEYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTIPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00564 466 FunFam Carboxypeptidase 28 463 - -
Pumo6g00564 466 Pfam Serine carboxypeptidase 43 458 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 SUPERFAMILY alpha/beta-Hydrolases 41 463 IPR029058 -
Pumo6g00564 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 Gene3D - 360 458 - -
Pumo6g00564 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 446 IPR001563 GO:0004185|GO:0006508
Pumo6g00564 466 FunFam Carboxypeptidase 360 459 - -
Pumo6g00564 466 Gene3D - 314 349 - -
Pumo6g00564 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Pumo6g00564 466 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Pumo6g00564 466 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00564 Pumo-Chr6 7124406 7127317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00564 322 462 Calmodulin-binding Proteins AT2G22960 29.078 9.57e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00564 K16297 - gmx:100800002 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00564 6 7124406 7127317 Pumo6g00564 6 7124406 7127317 ECH