Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00562 ATGGCTCCCTTCGACCAATCTCGCCACTCTCTTGTCCCTGGATTCTTGTACTCATCAAAAACACTGTCCCATTTGAATAATAACACCAACCATGGGTTACCACCATCATCCTCCATTGCATCACATTCACCATCATCATTGCCACAGGGTGGGGCCAAGAGTCCTATGATCCTTTCACCCAAAGAGGGAATCCGCATGTTTTCTCCTGCTTACTATGCCGCATGCAGTGCCGGTGGTGTCTTCAGCTGTGGCCTCACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCACATCAGGATTTGGAGTGTTACTGAAGGAGCAAGGCGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTAGGCTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTACTACTCAGACCTTGCAGGACCCGAGAATGCAATCAAGTACAAAACGATCATATATCTAGCAGGTTCTGCTTCAGCAGAAGTTATTGCTGATGTTGCCCTTTGCCCCATGGAAGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTGTCAGATGGCTTACCCAAGTTTATCAAGGCTGACGGTGTTTCTGGGTTGTATAGAGGGCTAGTCCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACTGTTGTGGAGATGATCTACAAATACGCCATCCCAACCCCTAAGGAGAAGTGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATATATAGCAGGCGTGCTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCAAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGAGTAGTAGGCCTTTTCACTCGTGGCCTTCCACTTCGTATAGTTATGATTGGAACACTAACTGGAGCCCAGTGGGGACTCTATGATTCATTTAAAGTATTTGTAGGGCTGCCTACTACTGGAGGAAGTGCTCCTGCTCCTGTTAAGTAG 1089 0.472 MAPFDQSRHSLVPGFLYSSKTLSHLNNNTNHGLPPSSSIASHSPSSLPQGGAKSPMILSPKEGIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAIKYKTIIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFIKADGVSGLYRGLVPLWGRQIPYTMMKFASFETVVEMIYKYAIPTPKEKCSKNKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00562 362 SUPERFAMILY Mitochondrial carrier 71 342 IPR023395 -
Pumo6g00562 362 Gene3D Mitochondrial carrier domain 71 348 IPR023395 -
Pumo6g00562 362 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Pumo6g00562 362 Pfam Mitochondrial carrier protein 172 255 IPR018108 -
Pumo6g00562 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Pumo6g00562 362 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 55 358 IPR044677 GO:0005315|GO:1990547
Pumo6g00562 362 FunFam Phosphate carrier protein, mitochondrial 70 348 - -
Pumo6g00562 362 MobiDBLite consensus disorder prediction 27 52 - -
Pumo6g00562 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
Pumo6g00562 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00562 Pumo-Chr6 7109574 7113029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00562 5 360 Chloroplast and Mitochondria Gene Families AT5G14040 75.683 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00562 K15102 - gmx:100800530 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00562 6 7109574 7113029 Pumo6g00562 6 7109574 7113029 ECH