Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00547 ATGGAGTTTGTGAAGAAGTGCAAGAGAGTATTGGGAAGCAGCAAGAGATTGCATCCTGAAAACGGTGGAAGTGGCAGCTACGGCAGATTGAGCACAAACAAGATCAAGAAGGCTCCACAGGGTTGCCTTTGTGTCTACGTTGGACTCGAGAGAGAGAGATTCGTGATTAAGGTAAAGATCGCAAACCACCCTTTGTTCAAGGCGCTATTGGACGCTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCTTTATGGCTCCCTTGCGACGTTGACTTGTTCTGTGAGGCACTAACGGAGATGGAGAGCACCCAACATGAACATGATGATGATATGGGTTCAGTAGGTTGCGCCTTTTCTATGGGTCACAGTTTCAGGCACAGCCCCTCATCGGCTTCTTCTAATTACCTCACTTGTAGATATGTCACAGGATCTGTCGTTGCCCATTACGAAACCCTTGTGAGTTAA 468 0.4722 MEFVKKCKRVLGSSKRLHPENGGSGSYGRLSTNKIKKAPQGCLCVYVGLERERFVIKVKIANHPLFKALLDAAEREYGYRNDGPLWLPCDVDLFCEALTEMESTQHEHDDDMGSVGCAFSMGHSFRHSPSSASSNYLTCRYVTGSVVAHYETLVS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00547 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 96 IPR003676 GO:0009733
Pumo6g00547 155 Pfam Auxin responsive protein 6 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00547 Pumo-Chr6 6824132 6824965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00547 28 94 Calmodulin-binding Proteins AT4G34750 44.776 1.81e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00547 K14488 - gmx:102667331 224.172