Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo6g00510 | ATGGGCACCAAGTTTTTAGCGTTAGCTTGTATACGTAACAATGAGGGTTCGGGGCACCTATCACCGCGACCTCACTACCCGTCGATGCCGAGATACCCTAAGGGCGTGACGGAAGAAGAAGGGAGCAGCAACATATCGTCCAAGGCACTTTTCTCGGTCACCGGAATGACTTGCTCCGCCTGCGCCGCCTCCGTCGAGAAAGCCGTCAAGCGCCTTCCCGGAATTCGCCAAGCCGTCGTTGATGTTCTCAACAACCGTGCTCAAGTCCTCTTCTACCCATCCTTTGTTAACGAAGAGACCATTCGCGAAGCAATTGAAGATGCTGGATTCCAAGCCACACTAACCAGAGATGATAACGAGACATCTGTTCAGATATGCCGCATACGTATCCAAGGCATGACATGCACGTCGTGTTCCTCCACCGTTGAATCCGCTCTACAATCAATCCAAGGAGTGGTGAAAGCCCAAGTGGCTCTTGCAACCGAGGAAGCTCAAGTTCACTACACTCCAAACGTTGTCACCTACAACCAAATCTTGGAAGCTGTAGAAGACACCGGTTTTCAAGCCACGCTTATAAGCACAGGTGAAGACATGAGCAGAATAGACCTTCAAGTTGAGGGTGTAAGAACTGGTCGTTCCATGAGACTCATTGAAAATTCTCTTCAGGCCCTCCCTGGGGTCCAAGGTGTAGAAACACACCCTTTGTTGAACAAAGTGTCTCTTTCTTATAAACCAGACTTGACAGGACCTAGAAACTTCATCAACGTGATTGAAGAAACCGGGTCTAGGCGTTTCAAGGCAAAGATTTTCCCTGAAGGAGGAAGAAGGAATAGTCATAGGAGGGAGGAAATCAAGCAATACTATAGATCCTTCTTGTGGAGTTTGGTGTTTACTATTCCTGTGTTTCTAACCTCTATGGTGCTTATGTATATCCCTGGAATTAAGCATGGACTAGATGCTGAAGTTGTGAACATGCTTACAGTGGGGGAGATTATAAGATGGGTGCTTTCTACACCAGTGCAGTTCATTATAGGGAAGAGGTTTTACTCTGGTGCTTACAAAGCATTACGCCTTGGCTCTCCCAACATGGATGTTTTGATTGCCTTGGGGACAAATGCAGCATACTTTTACTCAGTGTATTCTGTGCTGAGAGCTGCTACATCTCAGGGTTTCAAGGGTACTGATTTCTTTGAGACTAGTGCTATGCTTATTTCGTTTATTTTGCTAGGAAAGTACCTTGAGGTTTTGGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTCATGAACTTGACTCCTGATACTGCTATATTGTTGACCCTGGACAGTGAAGGGAATGTTGTTGGTGAGGAGGAAATTGATAGCAGGTTGATTCAAAAGAATGATGTGATTAAGATTATTCCTGGTGCAAAAGTGGCTTCAGATGGATTTGTTATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATTACAGGTGAGGCACGTCCTGTGGCAAAGAGGAAAGGTGACACTGTTATTGGAGGAACTCTGAATGAGAATGGAGTGTTGCATGTTAAGGCTACGTGGGTTGGATCAGGGAGTGCTCTTTCTCAGATTGTTAGACTTGTTGAGTCAGCACAGATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGCATTTCCAAATACTTTGTGCCTCTGGTTATTTTAATCTCATTTTCAACTTGGCTTGCATGGTTTTTGGCTGGAAGATTTCATGCTTACCCTAAGTCTTGGATACCATCTTCCATGGATAGCTTTCAGCTAGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCCTGTCCATGTGCTTTAGGTTTAGCCACACCAACTGCTGTTATGGTTGGCACTGGAGTTGGTGCATCTCAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGCGTTGTATTTGACAAGACAGGTACTCTCACTATCGGGAAGCCTGTGGTAGTAAATACAAAGTTGTTGACAAATATGGTACTCCGCGAATTCTATGAATTTGTGGCTGCAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAAAAACTGAGAGATGAAGAGAACCCCATTTGGCCAGAGGCACGTGATTTTGTGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAACAAGGAAATACTTGTGGGTAACAAGACCTTGATGGCGGACCACAATGTTGCACTTCCCGTTGATGCTGAAGAGATACTTGCAGAAGCGGAAGAAATGGCTCAAACTGGAATTATAGTGTCTATAAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCGGCTGCACAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGAGACAATTGGGGAACTGCCAATTCTATAGCAGGGGAAGTTGGAATTGAAACTGTTATTGCTGAGGCCAAACCAGAGCAGAAGGCAGAGCAAGTGAAGGAACTGCAGGCTTCTGGGTACAGGGTGGCTATGGTGGGGGATGGTATTAATGATTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATTGGTGCTGGTACAGACATTGCCATTGAGGCTGCTGATATTGTCCTGATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTACCCGTATCCGCCTCAACTACATATGGGCTTTGGGTTATAATCTGCTTGGCATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCGGTTGCCCCCATGGGTTGCTGGGGCTGCCATGGCTGCATCTTCTGTCAGTGTTGTGTGCTGCTCTCTACTGTTGAAGTATTATAGGAGACCCAAGAAGCTGGACAACCTTGAGATACGGGGCATAAGCATTGAGTGA | 2952 | 0.4583 | MGTKFLALACIRNNEGSGHLSPRPHYPSMPRYPKGVTEEEGSSNISSKALFSVTGMTCSACAASVEKAVKRLPGIRQAVVDVLNNRAQVLFYPSFVNEETIREAIEDAGFQATLTRDDNETSVQICRIRIQGMTCTSCSSTVESALQSIQGVVKAQVALATEEAQVHYTPNVVTYNQILEAVEDTGFQATLISTGEDMSRIDLQVEGVRTGRSMRLIENSLQALPGVQGVETHPLLNKVSLSYKPDLTGPRNFINVIEETGSRRFKAKIFPEGGRRNSHRREEIKQYYRSFLWSLVFTIPVFLTSMVLMYIPGIKHGLDAEVVNMLTVGEIIRWVLSTPVQFIIGKRFYSGAYKALRLGSPNMDVLIALGTNAAYFYSVYSVLRAATSQGFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLTLDSEGNVVGEEEIDSRLIQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTLNENGVLHVKATWVGSGSALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISFSTWLAWFLAGRFHAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYEFVAAAEVNSEHPLAKAIVEYAKKLRDEENPIWPEARDFVSIAGHGVKAMVRNKEILVGNKTLMADHNVALPVDAEEILAEAEEMAQTGIIVSINREVVGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAGEVGIETVIAEAKPEQKAEQVKELQASGYRVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFTRIRLNYIWALGYNLLGIPIAAGALFPSTRFRLPPWVAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE | 983 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo6g00510 | 983 | Gene3D | - | 418 | 540 | - | - | |
Pumo6g00510 | 983 | SUPERFAMILY | HAD-like | 649 | 960 | IPR036412 | - | |
Pumo6g00510 | 983 | Pfam | E1-E2 ATPase | 449 | 628 | - | - | |
Pumo6g00510 | 983 | CDD | P-type_ATPase_Cu-like | 289 | 964 | - | - | |
Pumo6g00510 | 983 | SUPERFAMILY | HMA, heavy metal-associated domain | 195 | 262 | IPR036163 | GO:0046872 | |
Pumo6g00510 | 983 | PRINTS | Copper-transporting ATPase 1 signature | 103 | 123 | - | - | |
Pumo6g00510 | 983 | PRINTS | Copper-transporting ATPase 1 signature | 74 | 97 | - | - | |
Pumo6g00510 | 983 | PRINTS | Copper-transporting ATPase 1 signature | 48 | 73 | - | - | |
Pumo6g00510 | 983 | PRINTS | Copper-transporting ATPase 1 signature | 148 | 169 | - | - | |
Pumo6g00510 | 983 | NCBIfam | HAD-IC family P-type ATPase | 403 | 935 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Pumo6g00510 | 983 | Gene3D | - | 44 | 115 | - | - | |
Pumo6g00510 | 983 | NCBIfam | copper ion binding protein | 50 | 112 | IPR006122 | GO:0005507 | |
Pumo6g00510 | 983 | NCBIfam | copper ion binding protein | 128 | 189 | IPR006122 | GO:0005507 | |
Pumo6g00510 | 983 | Gene3D | - | 124 | 196 | - | - | |
Pumo6g00510 | 983 | FunFam | Copper-transporting ATPase 1, putative | 418 | 540 | - | - | |
Pumo6g00510 | 983 | FunFam | Copper-transporting ATPase HMA5 | 46 | 117 | - | - | |
Pumo6g00510 | 983 | Gene3D | - | 617 | 911 | IPR023214 | - | |
Pumo6g00510 | 983 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 395 | 929 | IPR023298 | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 486 | 500 | - | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 877 | 889 | - | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 779 | 790 | - | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 854 | 873 | - | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 801 | 811 | - | - | |
Pumo6g00510 | 983 | PRINTS | P-type cation-transporting ATPase superfamily signature | 650 | 664 | - | - | |
Pumo6g00510 | 983 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 652 | 658 | IPR018303 | - | |
Pumo6g00510 | 983 | ProSiteProfiles | Heavy-metal-associated domain profile. | 199 | 265 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | Gene3D | - | 199 | 261 | - | - | |
Pumo6g00510 | 983 | NCBIfam | heavy metal translocating P-type ATPase | 363 | 963 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 | |
Pumo6g00510 | 983 | SUPERFAMILY | HMA, heavy metal-associated domain | 48 | 118 | IPR036163 | GO:0046872 | |
Pumo6g00510 | 983 | ProSiteProfiles | Heavy-metal-associated domain profile. | 47 | 113 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | FunFam | Copper-transporting ATPase HMA5 | 123 | 194 | - | - | |
Pumo6g00510 | 983 | CDD | HMA | 128 | 190 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 1 | 979 | - | - | |
Pumo6g00510 | 983 | SUPERFAMILY | HMA, heavy metal-associated domain | 123 | 195 | IPR036163 | GO:0046872 | |
Pumo6g00510 | 983 | CDD | HMA | 51 | 113 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | SFLD | Haloacid Dehalogenase | 632 | 906 | - | - | |
Pumo6g00510 | 983 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Pumo6g00510 | 983 | ProSitePatterns | Heavy-metal-associated domain. | 130 | 159 | IPR017969 | GO:0046872 | |
Pumo6g00510 | 983 | Gene3D | - | 735 | 785 | IPR023299 | GO:0000166 | |
Pumo6g00510 | 983 | Gene3D | - | 657 | 734 | IPR023299 | GO:0000166 | |
Pumo6g00510 | 983 | ProSiteProfiles | Heavy-metal-associated domain profile. | 124 | 190 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | ProSitePatterns | Heavy-metal-associated domain. | 53 | 82 | IPR017969 | GO:0046872 | |
Pumo6g00510 | 983 | SFLD | p-type atpase | 632 | 906 | IPR044492 | - | |
Pumo6g00510 | 983 | SUPERFAMILY | Calcium ATPase, transduction domain A | 450 | 536 | IPR008250 | - | |
Pumo6g00510 | 983 | FunFam | Probable copper-transporting ATPase HMA5 | 772 | 911 | - | - | |
Pumo6g00510 | 983 | Pfam | Heavy-metal-associated domain | 128 | 187 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | Pfam | Heavy-metal-associated domain | 51 | 110 | IPR006121 | GO:0046872 | |
Pumo6g00510 | 983 | Pfam | haloacid dehalogenase-like hydrolase | 646 | 868 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo6g00510 | Pumo-Chr6 | 6332651 | 6338446 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo6g00510 | 1 | 983 | Primary Pumps ATPases | AT1G63440 | 76.334 | 0.0 | 1539 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo6g00510 | K17686 | - | gmx:100810141 | 1826.99 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo6g00510 | 6 | 6332651 | 6338446 | Pumo6g00510 | 6 | 6332651 | 6338446 | ECH | |
Pumo8g02307 | 8 | 60311235 | 60317458 | Pumo6g00510 | 6 | 6332651 | 6338446 | PCT |