Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00509 ATGATGGGTAAGCTGAAGGTGTATGCGGATCGAATGTCACAGCCTTCTCGAGCAGTTCTCATATTCTGCAGGTTTAACGGAATTGATTTTGAGGAGATTAAAGTAGACATTTCCAAACGCCACCACCTCTCTCCTCAATTTAGAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATAGTTCATGGAAGCTTCAATCTCTCCGAGAGCCATGCAATCCTTGTCTATCTTACTTCTGCTTTTCCTGGAATTGCTGACCATTGGTATCCTAGCGATCTTTTCAGGAGAGCCAAAATTAACTCAGTAATGGATTGGCATCACTCTAATTTACGACATGGAGCAGTGAACTATGTAATAAATACTGTACTAGGACCTGGAACTGGCCGTCCACTCAATCCAAAAGCAGCTGCTGAAGCAGAGAAAGTTCTATTATCCTCTTTATCAAAACTAGAGGATATTTGGCTCAATAGAGATGGACGCTTCCTGCTTGGTGGCTCTCAGCCATCTATAGCAGATCTCAGCATGGTTTGTGAACTCATGCAACTTGAGGTTTTGGATGAGAAGGATCGCAGTCGTATAATATCCCCATACAAGAAAGTTCTTCAGTGGATTGAGGATACAAGAACTGCAACAAATCCTTACTTTGAAGAAGTGCATAATATCCTTTATAGAGCTAAAAAGAAATTTGAACAGCAGCGTTCAAGGTTAGCTGAAACTGGGACTGAGCCTAGCAACAAGATGGGGGGCCATTCAAAGATGTGA 759 0.4242 MMGKLKVYADRMSQPSRAVLIFCRFNGIDFEEIKVDISKRHHLSPQFREVNPLQKVPAIVHGSFNLSESHAILVYLTSAFPGIADHWYPSDLFRRAKINSVMDWHHSNLRHGAVNYVINTVLGPGTGRPLNPKAAAEAEKVLLSSLSKLEDIWLNRDGRFLLGGSQPSIADLSMVCELMQLEVLDEKDRSRIISPYKKVLQWIEDTRTATNPYFEEVHNILYRAKKKFEQQRSRLAETGTEPSNKMGGHSKM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00509 252 Gene3D - 84 241 - -
Pumo6g00509 252 CDD GST_C_Theta 94 223 IPR040077 -
Pumo6g00509 252 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 244 IPR043377 -
Pumo6g00509 252 CDD GST_N_Theta 5 80 IPR040075 -
Pumo6g00509 252 MobiDBLite consensus disorder prediction 232 252 - -
Pumo6g00509 252 MobiDBLite consensus disorder prediction 235 252 - -
Pumo6g00509 252 SFLD Glutathione Transferase (cytosolic) 4 232 IPR040079 -
Pumo6g00509 252 SUPERFAMILY Thioredoxin-like 2 89 IPR036249 -
Pumo6g00509 252 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Pumo6g00509 252 SUPERFAMILY GST C-terminal domain-like 85 217 IPR036282 -
Pumo6g00509 252 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Pumo6g00509 252 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
Pumo6g00509 252 Gene3D Glutaredoxin 4 83 - -
Pumo6g00509 252 FunFam Glutathione S-transferase theta-1 85 233 - -
Pumo6g00509 252 SFLD Main.4: Theta-like 4 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00509 Pumo-Chr6 6328852 6332490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00509 2 240 Glutathione S-transferase Gene Family AT5G41210 64.017 4.79e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00509 K00799 - gmx:100799229 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00509 6 6328852 6332490 Pumo6g00509 6 6328852 6332490 ECH