Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00498 ATGTCTGGATGCAATAAATCATCCAAAAATGATCAACAATCAATCAAATATTGGCGGATTCAACACGGAGGGGTATCCTCTGAGGCTGATCTTTCTTGTGTAGATTATTCGCCCTCTCTTTCCAACAATGAGAACAAGCAATGCTATGGAAGTTCTCAACCAAAGTCCCCTCAGATACTGAGCACGGCTCAGCTCATCTCTGCAATAGGCCAGATATGGGATTCTGCCAGTCGCCCACTTTCGGTTTTACTCCCGAAGGAAACTGTGAATCAGGATGATAAAGGATTCCAGAAAGAGAAAGTTCTGGATAGCGTTGATGAGAAAAAAAATGAGTTGGTATATGCTTCAAGTGACATTAAATACTATCCTGTTACCATGGGCGGTGCAAAGATTGTGCAGGGAAAATTGGATTTCCCTAGGGTAATGCAGAAGATATCAGTACTTGACTCTTCTAATGAAAGTCAAGATTATATTCATTCTTTATTCCAGAGGTGTTTGCAGGCTAGTGATAAAAATACAAATAAAGATTGGAAAGAAATGGAACTTAGGAGGGAGGAAATGTCATGTAAATCAGGAGGAAATGTATATTGGTGGTTAGGTAGGAATGCTACTAAGACGCTAAATTGTCAAGTGAATGTTACCCAACCTGAGAACCTGGAAACTAGTTCTCCAGTTGCTGGGGGTAATATTTCAATGGATACAAGCACCCCTGAATTGGCTAATGAGAGTGATGTGTGTAGTCCTAATTCAATCACAAATGAAACTCAATCATTATCTAATGCTGCAATACTGAACACAAGAATAGTTAGCCCTCTGTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTAAGGCAGACGTTAGTACTTGTCAGACCCTTTCTTCTAGTATCTGTGCAGACTATCATATTAACTCTTTAGCCTCCTGTAATAGTGCTTCTGATCAGTCTCAACATGAGATTGATGATAATGAATCACTGGAAATCCAAAGAAGACATTTCTTGGATATAACTGGTGCTGAGCCTAAGGTTCAGACCTTCTCTGCAACCCATCTGAAGCCTTGTAATTCCCAAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTAGCTGGTATATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAGACAGTCATTCAATCATGCCGTGCTGAACACAGGTCCATCTTTTACATTGGGAAGTCAATTGTTTCTGATAGAGGTTTGCTTGGATTGTATCGTGGAATTACCACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCTCATATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAATATTATTCATTTGCCCATTGCATGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCCAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTTTACCTCCCTTTATGCAGGTTGGAGAGCTGTACTGTGCCGGAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCCTGAAGCAAGTGATGCCATCTAGTATTCAACCCAACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACTCAGATTCCTGGATCTGCAAATCAATATGATAGTGTGCTCCATGCCCTTTACAAAATTAGTAAGAGTGAAGGTTTCAAGGGCCTGTACAGGGGGTTGATTCCACGGTTGATTATGTACATGTCTCAAGGATCACTGTTTTTTGCTTCATATGAATTTTTCAAGAGGGCATTTTCTCTGGAAGCATCACACCCCACTGATTTATGCATTCAGGACAATGACGGGAATGTTGAAGACAGAAAAAACTTGGAATTAACAAGTTCATCATAG 1986 0.4028 MSGCNKSSKNDQQSIKYWRIQHGGVSSEADLSCVDYSPSLSNNENKQCYGSSQPKSPQILSTAQLISAIGQIWDSASRPLSVLLPKETVNQDDKGFQKEKVLDSVDEKKNELVYASSDIKYYPVTMGGAKIVQGKLDFPRVMQKISVLDSSNESQDYIHSLFQRCLQASDKNTNKDWKEMELRREEMSCKSGGNVYWWLGRNATKTLNCQVNVTQPENLETSSPVAGGNISMDTSTPELANESDVCSPNSITNETQSLSNAAILNTRIVSPLCSDYFLQAVPDTKADVSTCQTLSSSICADYHINSLASCNSASDQSQHEIDDNESLEIQRRHFLDITGAEPKVQTFSATHLKPCNSQAKQEHAFSGALAGICVSLCLHPVDTIKTVIQSCRAEHRSIFYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFSYESVKAALLPYLPKEYYSFAHCMGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGFTSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPSSIQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGFKGLYRGLIPRLIMYMSQGSLFFASYEFFKRAFSLEASHPTDLCIQDNDGNVEDRKNLELTSSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00498 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
Pumo6g00498 661 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Pumo6g00498 661 Pfam Mitochondrial carrier protein 452 535 IPR018108 -
Pumo6g00498 661 Pfam Mitochondrial carrier protein 542 631 IPR018108 -
Pumo6g00498 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 541 629 IPR018108 -
Pumo6g00498 661 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 327 634 - -
Pumo6g00498 661 FunFam S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform A 330 451 - -
Pumo6g00498 661 FunFam Mitochondrial substrate carrier protein-like 484 643 - -
Pumo6g00498 661 SUPERFAMILY Mitochondrial carrier 362 626 IPR023395 -
Pumo6g00498 661 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Pumo6g00498 661 Gene3D Mitochondrial carrier domain 451 654 IPR023395 -
Pumo6g00498 661 Gene3D Mitochondrial carrier domain 331 450 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00498 Pumo-Chr6 6225907 6230402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00498 366 630 Chloroplast and Mitochondria Gene Families AT1G07030 32.852 1.17e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00498 - - gmx:100812271 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00498 6 6225907 6230402 Pumo6g00498 6 6225907 6230402 ECH