Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00497 ATGAGTGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGGACAATATACCAAGTATTGTTTCCTTGACTTGCACACACTTGGGATTTGGAATACAGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGGCAGATGTCCTTGAGTTGATGAATATTGGTGTTCTCTCTGTTCATGTTCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGTCTTCATCTTGTAGATCTTGCAGGAAGTGAAAGGGTGGATCGTTCTGAAGCAACTGGAGACAGGCTTAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTAGGAGATGTGATATTTGCTCTATCACAAAAGAGTTCACACGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCGAAAACCCTTATGTTTGTACAACTTAATCCTGATGTTGCTTCATTTTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGCATCTCTCAAGGATGTAATTGCAAGGAAGGATGAAGAGATTGAGCGGTTACAGTCGCTCAAGGCTAATCATAATGGTGTGAAGCTTGGTATGATCTCAGTAAGACACGAGTCATCATCTCCAAGGAGACGTTCCATAGGGACTCCCCGAAATAGCACAAGACTTGCAGCAAGGAGCTTTGGAGTCAATGGAAAAGCAGCTTCTGACATGGATAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGTTCCCTTCGGTTGAAATTAGCCAGAGATGATATCAATCAAAATTTTAATGAGGACACTGATCTCTTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACTGAAGGTTCAATCAGCAGTATAGTGGAGTACACTCTTTTCCCAGAACTCGAGAAGGCAGCTGAAACTACACCAGCGAAGGACACCACAACCGACAACCTTCCAGCTGAGAGCACAGAAAAGCCCATTATGCCATCCAGAATTCCCAAAGCTGCTCAAGTCCCACAAAAAGTGCAGTCAAGACCTTCTAGGCTTTCATTGAACAAAACCTCCTCGAAGGTTCTGTCAAGTGTTAGAAAACCGGCAGCCAGTAGCTCTTCTTCAGTGAAGCCCCTTAAACGATGGCAATAG 1428 0.4314 MSGPGLSSKSDWGVNYRALHDLFHISQSRRSSIVYEVGVQMVEIYNEQGQYTKYCFLDLHTLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNIGVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASFSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQLASLKDVIARKDEEIERLQSLKANHNGVKLGMISVRHESSSPRRRSIGTPRNSTRLAARSFGVNGKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLARDDINQNFNEDTDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAETTPAKDTTTDNLPAESTEKPIMPSRIPKAAQVPQKVQSRPSRLSLNKTSSKVLSSVRKPAASSSSSVKPLKRWQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00497 475 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 436 IPR027640 GO:0003777|GO:0007018
Pumo6g00497 475 SMART kinesin_4 1 223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00497 475 MobiDBLite consensus disorder prediction 435 475 - -
Pumo6g00497 475 MobiDBLite consensus disorder prediction 308 329 - -
Pumo6g00497 475 Pfam Kinesin motor domain 97 213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00497 475 ProSiteProfiles Kinesin motor domain profile. 1 215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00497 475 MobiDBLite consensus disorder prediction 400 475 - -
Pumo6g00497 475 Gene3D Kinesin motor domain 1 257 IPR036961 -
Pumo6g00497 475 PRINTS Kinesin heavy chain signature 116 134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00497 475 PRINTS Kinesin heavy chain signature 165 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g00497 475 MobiDBLite consensus disorder prediction 280 294 - -
Pumo6g00497 475 Coils Coil 229 259 - -
Pumo6g00497 475 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 153 234 - -
Pumo6g00497 475 MobiDBLite consensus disorder prediction 271 329 - -
Pumo6g00497 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 253 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00497 Pumo-Chr6 6217950 6220561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00497 97 215 Calmodulin-binding Proteins AT5G65930 56.303 2.98e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00497 K10406 - gmx:100812813 813.527