Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00492 ATGGCGAGAAGATCTCCTCCTCGGGTTAACCAAACGTACGAGACAGGCTGTACGTGGCGAATGTTTAGAATCTTTAATTTCCGTGAAGGTCATTCTGACAGAAGATTGGTTTCCAACAGGAGGCATTTGAATGCTCATGCTAATGGAAATGGAAACTCTAGAAGTAGATCAGACGTGCTTAGCACAGTTGATGAGAAGTACCTTCAAATTGGTGTAAGTTCCAGAAGAAGAAGAGATTATAGTTGTAAAAGTATCAGCAGCGTGGAGAATGATCAGGTAGCAGATTGGACAGATGAAGTAACAAAGATGATTGTTGATCAGAGATTTGTCAATAAAAATTATCAGGGCAAAGATGGGGAAGGCTGTGAGCCTAATCAATTCTTGGATGCTTTACAGATTTTATATTCAAACAAGGAGCTTTTCATAAAACTTCTGCAAGATCCGAACTCTTTGTTAGTAAAACAGATTCATGACTTACAAAGTTCTCAAGTGAAAGAACAATATCAGCAGGCAAGGCAAAAAAGGATGACTAGATTAAATAAGCCTCAAGATAGTTACGCTACACAATGTGTAAAACCTTTTAAGTCCTTTGATATATCTGATTTGAGGTCAAGTTGTAGGCCTCAGCCCTCAAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAACAAGCTTTGTTAGCCCTCCCCATTCACCTGATAGCTTCAGTTCTAATGAACAAAATATTAGGCCTTCATATTTTCCCTTTAGTTGTATAAAGAGAAAATTGAAGCATGTCATGAGAGTAAGGAGACAAGAACAGCAGTGGAGGACAGATGATGAAATGTCATGTAAATTTTCCTGCAGTTCCCAGGGCTTGGAAGATGGTAAAAAAGTAAAAGAATTGGAAATTGCTGAAAGAAATTCACCAATTAATGCCCATCCTAATACTGGAAAAAGGTTGAATTCATATCTTGATATGAAGAAGAGGGGCAATATTATCAAGTTGAAGGATTCTGAGTTATGTATGGGGCTGGAAGCTGCTTCATTTGGTGAAAGTTGCAGTAAGAATACATATAATACTTCAGTTGGCCCTTGTGAGGAAAATATATTGAACATGCATGTTGAAGGTAGGAAAGGTCCATCTCAGATGTTAAACTGTGGAATTGAGGAATGTGAACAGTGCACAAACTCTCTAGGGAGATCAGTTCCTCTTCCTGACTCTTTGTACTTGCCAAGCATGCATAGATACTGCGAGCATAGTTCCATCACTGAAAGGATGAGAGATTACAGCAACTATCAAATGGTCCCCAGAACCAGGTTGGGGCTTCCAAAAGAAGGAGAAAATGGTTCCTATAATTTTTTGGAACCGAAAATCAAGGATTCACCATTGGCCATTTTTAATATACATACTGATAAGTTGCAACTTTTTGGTGAAGATATTAGTATCAGAAATAGTGTTCCTGGCTACAATCTATTTGCACATTATGATATTCCTAGAGATGGCAGATTCACGGACAGCCCTACTCAGAACATTGACATGAATGATAAAACCGGAGGAAGTGGATCGTTTCTGAGATCCAGACTTTTCCTTTTTCACAAGCTGTTTCATCAAGCCTTTCATCCAGTCAGAGAACAGGATGCTTCTGTAAACATGGGAAACAAAGTTGAACACACCAGTGTTGAATCTGTTGTTGAGCAATTTATTAAGGATGATGTTACCAACCCACAAATCACCACCTTTCAACCAGATGAGTCACCAATTCAAATAATGCATGACAAATTTGAAGAGAACCATTTTGAAGACCTTATAAGACTCTCTTTGGATCCAAAGAACAATTTAACCTCCTCCAAGGACATCTTACACTATGTAAGAGAAATTCTGCATGCTCTCAGCTTAAAATGGGATGAACTTACTCTGAAGAGATCATGTGACCAATTGCTGGATCCATCCACCTTTGTTGAACTGAAGGAACTAACTCGTCAACTTTCTGGTGGTACAATCTTGCATGACCGTGTCATCGAAATTTTCATGCAGGTACATCAGAACTGTGGTTTCCCACCTCATGTTTCAACACAAAATCCAAACGTTCAAGCATATGTTGTGAAGAAAGTTCTGGTTAAAGAGATTACAGAACTAGTTAAGTGGCACTTTCACCCTCGTCCATCACCTTTAACGGTGGAACAGCTTGTTGAAAAGGACTTAGCAAGACGTGGTGCATGGCTAAATATCCAAGTTGATACAGAAGATATTGCAATAGAGGTGGAGAAAGATGTTCTTGAAAAACTGGTATTGGAAATTGCATCTGAGATGGATTTCAGAAAAAGGACACATTGCAGTGAAGCTATGTCTACTTACTCGTGGGATGATAAAGCACGTAGGAAGGATTATGTAGCTACCATTTTTTGA 2397 0.3888 MARRSPPRVNQTYETGCTWRMFRIFNFREGHSDRRLVSNRRHLNAHANGNGNSRSRSDVLSTVDEKYLQIGVSSRRRRDYSCKSISSVENDQVADWTDEVTKMIVDQRFVNKNYQGKDGEGCEPNQFLDALQILYSNKELFIKLLQDPNSLLVKQIHDLQSSQVKEQYQQARQKRMTRLNKPQDSYATQCVKPFKSFDISDLRSSCRPQPSNRIVVLKPGTVNVETSFVSPPHSPDSFSSNEQNIRPSYFPFSCIKRKLKHVMRVRRQEQQWRTDDEMSCKFSCSSQGLEDGKKVKELEIAERNSPINAHPNTGKRLNSYLDMKKRGNIIKLKDSELCMGLEAASFGESCSKNTYNTSVGPCEENILNMHVEGRKGPSQMLNCGIEECEQCTNSLGRSVPLPDSLYLPSMHRYCEHSSITERMRDYSNYQMVPRTRLGLPKEGENGSYNFLEPKIKDSPLAIFNIHTDKLQLFGEDISIRNSVPGYNLFAHYDIPRDGRFTDSPTQNIDMNDKTGGSGSFLRSRLFLFHKLFHQAFHPVREQDASVNMGNKVEHTSVESVVEQFIKDDVTNPQITTFQPDESPIQIMHDKFEENHFEDLIRLSLDPKNNLTSSKDILHYVREILHALSLKWDELTLKRSCDQLLDPSTFVELKELTRQLSGGTILHDRVIEIFMQVHQNCGFPPHVSTQNPNVQAYVVKKVLVKEITELVKWHFHPRPSPLTVEQLVEKDLARRGAWLNIQVDTEDIAIEVEKDVLEKLVLEIASEMDFRKRTHCSEAMSTYSWDDKARRKDYVATIF 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00492 798 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 86 - -
Pumo6g00492 798 Pfam Domain of unknown function (DUF4378) 618 762 IPR025486 -
Pumo6g00492 798 Pfam Protein of unknown function (DUF3741) 106 150 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00492 Pumo-Chr6 6160262 6164372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00492 539 765 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 29.565 1.92e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00492 - - gmx:100776560 1329.69