Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00481 ATGGAAGAATGGTCAACATTCTCTAATGGGTCTTCCTTAGATTGCCTTGGAGTTGAAACTGTTGGTGCATTTCCTGGAAATGGTTGTTGCCTGGGAAAAGACCATGTTGATAATGGTGCTGACCAGGACAAACTTAAACAGAAGTGCTTGTTCTATCAACTTTTCCCTGCTTACCTGAAGGATAATGGTTCTACAGGTGGTGTTCGGCCTTTGCCGGTTTTAGTCGACCGTCAACGGCTGGATTTGTACAAACTGTTCTCCCTGGTGAAGGAAAGAGGTGGGTATGCCCGAGTGTCGAAGAAAGGATTGTGGGGTTCTGTGACCAAGGAATTGGGTTTGAACCTTGGAGTTTGCTCATCTGTAAAATTAGTCTTTGACAAGTATCTGAATGATTTTGAAAGGTGGCTCAAGAAAACCTTTGAAGAGAAGAATTTAAAAAATGGGAACCGTGGGTGTGATTGGGGTTTAAAGTGGTTGCCATTGGGTATAGAGAAAGAGTTCAGAGCCCTGTTATGTCCAAATCTAAAGGACAAAGATGATGATGAACTTGTCAAGTCAGAATCAAATAAAAAAAAGAAAAACACTGATTTGGTTAACCACAACCACAACAATGATAATAATCTGTTGGACACCAAAGATCAAAATAATAAATCTGAGGATGTCCAATACATTGAAGGTGATAATGATGAAAAATCCGCTAATGGCGTTAAGGACAATCCTGCAACCTTGGGTGCAGAAGGTGCTGAGAAGGAATTTAACCCGCGCAAACGCAAACGGGATGCATTATCTGGCATGCTAAACTGGATGAAGCATATTGCAAAGCATCCTCTTGATCCTTTAACTCAACCGATACCAAAACCATCAAAGTGGAAGGAGTATAAAGGCCAGGACTTTTTTGGTCAATTTCTGAGGGCAAGAGAGGTTCTGTCACTGAGACAGCATGAAGAACCAAACAGTGGATTGTCTTCTTTGCAGAAGCAGAAGATGCACCCTGCCATGTATGAGGATCTTGGTCGTCATGCTACTGGCAAATTGAGATGCAGTGAAAGGCTGCCTTCCTCTGTTAAATCTCGGTCATGCTCATGCTGCAATCTATGTTCCCCCAACGGAAATAGATTGGCAAGTTCACACAATATGGAGGCAGAAAAATGTCCTCGGGAGAAAACGACTGAAACACTAGATGTATTGACCGCAACAATAGCTGAACCATCTGGAGATGAGTCTCTCAAGAAGCAAGTTTCTGTAGGTCCTCGTTTTCAAGCAGAAGTCCCAGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTGGGCACCCAGGTATGGTCTTTGAAAAATGACAAAGAACCTGCTACTGAAACAGATCTTGGGAGAGGAAGACAAGAGAAGTGTAGCTGTGAATTTCATGGTTCCGTTGCATGTGTTAGATTACATATTGCTGAAAATAGGATGAAATTGAAGCTTGAATTGGGTTCTGAATTTTACCATTGGGGATTTGATCGTATGGGTGAGGAAGTTTCACTTCAATGGACAATTGAAGAAGAAAAGAGATTTAAGGATATCATGAGATCAAATATTCCCTCCAAAAATAAATATTTTTGGAACAATCCATCCAAATACTTTCCAAAGAAGACAAGAAGAAACTTGGTTAGCTATTACTTCAATGTATTTCTTATTCAACTAAGAACCTATCAGAATCGGGTGACTCCAAAGAATGTGGATAGTGATGACGATGAAGTAGAATTTGGATCTTTTAGTGATGGTTTTGGGATGGAAGCTGTCAAGCGTCTTGGTGATGATGTCGTGGAGTGTTCTCTGAACAAGCAGTGCACTGATCTCGAATAG 1848 0.4123 MEEWSTFSNGSSLDCLGVETVGAFPGNGCCLGKDHVDNGADQDKLKQKCLFYQLFPAYLKDNGSTGGVRPLPVLVDRQRLDLYKLFSLVKERGGYARVSKKGLWGSVTKELGLNLGVCSSVKLVFDKYLNDFERWLKKTFEEKNLKNGNRGCDWGLKWLPLGIEKEFRALLCPNLKDKDDDELVKSESNKKKKNTDLVNHNHNNDNNLLDTKDQNNKSEDVQYIEGDNDEKSANGVKDNPATLGAEGAEKEFNPRKRKRDALSGMLNWMKHIAKHPLDPLTQPIPKPSKWKEYKGQDFFGQFLRAREVLSLRQHEEPNSGLSSLQKQKMHPAMYEDLGRHATGKLRCSERLPSSVKSRSCSCCNLCSPNGNRLASSHNMEAEKCPREKTTETLDVLTATIAEPSGDESLKKQVSVGPRFQAEVPEWTGVVSESDSKWLGTQVWSLKNDKEPATETDLGRGRQEKCSCEFHGSVACVRLHIAENRMKLKLELGSEFYHWGFDRMGEEVSLQWTIEEEKRFKDIMRSNIPSKNKYFWNNPSKYFPKKTRRNLVSYYFNVFLIQLRTYQNRVTPKNVDSDDDEVEFGSFSDGFGMEAVKRLGDDVVECSLNKQCTDLE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00481 615 MobiDBLite consensus disorder prediction 181 257 - -
Pumo6g00481 615 ProSiteProfiles ELM2 domain profile. 411 457 IPR000949 -
Pumo6g00481 615 SMART bright_3 46 138 IPR001606 GO:0003677
Pumo6g00481 615 SUPERFAMILY ARID-like 45 138 IPR036431 GO:0003677
Pumo6g00481 615 MobiDBLite consensus disorder prediction 181 199 - -
Pumo6g00481 615 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 42 610 - -
Pumo6g00481 615 SMART ARID_2 42 133 - -
Pumo6g00481 615 MobiDBLite consensus disorder prediction 212 234 - -
Pumo6g00481 615 Pfam ARID/BRIGHT DNA binding domain 50 133 IPR001606 GO:0003677
Pumo6g00481 615 Gene3D - 32 147 IPR036431 GO:0003677
Pumo6g00481 615 CDD ARID 51 133 - -
Pumo6g00481 615 ProSiteProfiles ARID domain profile. 45 137 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00481 Pumo-Chr6 6021633 6029600 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pumo6g00481 ARID 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00481 - - gmx:100819320 1110.52