Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00466 ATGATGTTGCAAAATTTCAAGAAGGAGCTGAGGTCACTTAATAGAGAGTTGCAACTACACGTCTTGGAGCTTGTTGATATTCTCATTGAGAGACCTTCACAGTATGCCAGGAGAGTCGAAGAAATTTCAACCGTATTAAAAAACTTACACCACCTTTTAAATTCATTGTGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAGCGCCGTAAACAAGCAGTGGAGGACATAAAGAGCTGCATGCATGCTCTTATGCACAAGGAATTCATTATATCAAGTAAGCTTGGGGTCTGA 312 0.4038 MMLQNFKKELRSLNRELQLHVLELVDILIERPSQYARRVEEISTVLKNLHHLLNSLCPHQARATLIHILELQIQRRKQAVEDIKSCMHALMHKEFIISSKLGV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00466 103 Gene3D - 2 93 IPR044888 -
Pumo6g00466 103 SUPERFAMILY Mediator hinge subcomplex-like 5 88 IPR037212 GO:0016592
Pumo6g00466 103 Coils Coil 3 23 - -
Pumo6g00466 103 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 5 87 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pumo6g00466 103 Pfam MED7 protein 5 89 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pumo6g00466 Med7 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00466 K15148 - gmx:100792250 145.206