Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00459 ATGGATGAATTTGCGTGCTTGAGGGACTGGGATTTGGAAGCTATTGTGAGAGGAAGCAGCGGTGAAGCCACCTCCATGAACGACCCAAATCCTGATTTTTCTTATTTCTTCTCTGAACAAGATGACCTACTTGATAGCTTTCCAGAATTCTCAGAAACCACGAGGGTCCTTGATGATTTGGAAGAGCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTTTCACCGCACTCCATCGTCACAACTTCCCTACCTATCCCCATAGAACCCGAACAAGTCAAAGCATCGGAAGAGAAAGTAGCTCTACAAGGGTTGAAAGTCCCCGCAGCACCTAAATGTAAAAAAATTAGCAAGAAGAGCCAGAACAAGAGTGTGGTGAAGCAGGTGACAACAGCGGAAGGTCTTGATGATGCATGGGCATGGCGAAAATATGGACAGAAACCAATAAAGGGTTCACCCTATCCTCGAAGCTACTATAGGTGCAGCAGTTCCAAAGGGTGTTTAGCAAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCAGTTTTTCTTGTTACCTACACTGCTGAACACAGCCATCCCCACCCAACTCGTAGAAACTCTCTTGCTGGGACCACTAGGAAGAACAATTCCCTAGTTCCACCTCCAACCACTCATCGTCACCAAAAGACGACTTGTTCCTCAACAAGGACACCTAATTTGGTGGTGAAGTCCATAGAAGATCGACTTGTAACGAGTGTGCATCAAAGCATGGACTTGAAGAAAGAGGAAGATTTTCTTGAGTGGTTGGATGATGATAGTGCTCAATTTGTTGGTGATGGTTGGATTCCAAGCTCGGATCTAGAGAAACTGATAGGACTTGAGTGCCAACATTTTGCATTAGATGCCGGTTTCACTGATGATTTTGCACACCCTTAG 918 0.4532 MDEFACLRDWDLEAIVRGSSGEATSMNDPNPDFSYFFSEQDDLLDSFPEFSETTRVLDDLEELYKPFYPVLHPLSPHSIVTTSLPIPIEPEQVKASEEKVALQGLKVPAAPKCKKISKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPTTHRHQKTTCSSTRTPNLVVKSIEDRLVTSVHQSMDLKKEEDFLEWLDDDSAQFVGDGWIPSSDLEKLIGLECQHFALDAGFTDDFAHP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00459 305 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00459 305 MobiDBLite consensus disorder prediction 192 228 - -
Pumo6g00459 305 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00459 305 MobiDBLite consensus disorder prediction 198 228 - -
Pumo6g00459 305 Gene3D WRKY domain 119 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00459 305 SUPERFAMILY WRKY DNA-binding domain 129 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00459 305 FunFam WRKY transcription factor 22 118 189 - -
Pumo6g00459 305 Pfam WRKY DNA -binding domain 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00459 305 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 86 231 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00459 Pumo-Chr6 5747682 5749346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00459 1 292 WRKY Transcription Factor Family AT4G23550 42.173 2.57e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo6g00459 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00459 K13426 K13425 gmx:102663255 509.99