Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00448 ATGAGCTCAGATGCGAGTAGAGAACGAGGTGCATCAACCGTGGTGGAACGGAAATTTCAATCTAGAACACTTTTGTTTTTGGCATACCAGAGTTTAGGCTATCTGTTTGGTGACTTGACCTTATCCCCTCTTTATGTCTATCAAAGTATATTTTCTGGAAGACTGAAAAAGGTCCAAAATGAGGATGCAATATTTGGCGCATTTTCTTTGATCTTTTGGGCTCTTTCAATTATTTCTTTGTTGAAGTATGCAATTATCATGTTAAGTGCAGATGATAATGGTGAAGGGGGAATTATTGCTTTGTATTCACAGCTTTGCAGAAATGCAAAATTTTGTTTGCTTCCTAATCATCAAGCTTCTGATGAGGAGCTTTCTACATATCACAAACCTGGTTCCTCAAATAGAAATATACCACCCTCACCTTTGAAAAGATTCATTGAGAAACACAAGAGTACAAAAACGGTCTTGCTTATTTTTATTTTACTGGGTGCTTGCATGGTAATTTGTGTTGGTGCACTCATGCCTGCCATTTCAGTTCGTTCATCCGTTGAAGGCCTGAAAATTGAAGCAAAGATTAAAAACAAAAGTATGGTGTCTCTTATTTCTTGTGTTCTACTGATTGGACTCTTTGTTATGCAACACCGTGGCTCCTACAAGGTTGCATTCGTGTTTCCTCCCATAATCATCCTATGGTTACTGACTATTTTCATGATTGGCATTTACAATGTCATCAAGTGGAATCCAAGAGTATATCAGGCTCTTTCTCCATATTATATATACAAGTTCTTTAGGCTTACAGGAAAAGATGGTTGGACTAATCTTGGAGGAGTATTTCTGTGTGTTACAGGAACTGAAGCTATGTTTGCAGACCTTGGGTACTACAGACAAACACCTTTAAGGGTTGCATTTTGTTGTGTCATTTACCCATGTCTAGTTCTTCAATACATGGGGCAGGCTGCTTTTCTTTCAAAGAATTTATCTGCAGTGCCTATAAGCTTTTATGCTTCTATTCCAGATATTCTATTCTGGCCAGTATTTGTGGTGGCTGCTTTGGCAGTAATAGTTGCAAGTCAGGCTGTCATCGCTTCAACATTCACAATTGTCCAACAATGCCATGCATTTGAATGTTTCCCTCGGGTTAAGGCAGTACATTCCAGAAGGTGGATCCCTGGTCAGACATATATACCAGAGATAAACTGGATTCTTATGATAATCAGCTTGGCTGTGACAGTTAGTTTAGGAGACATGAGCAATATAGGATACGCTTATGGGATGGCATATCTGATTGTGGTGTTTGTGACCACATGTTTGACATCACTAGTCATCAACCTTGTATGGAACCAAAGTCTTATAGTTGCTCTGGCATTTGCTTTATTCTTTGGTTCGATAGAGATTCTCTTCCTGTCATCCTATTGCATGAAAATCCTTAAAGGTGGCTGGATTCCTCTCGTGCTTTCTGCAGTCTTCATGGTTGTTATGTATGTGTGGCATTATGGTTCTAGGAAAAAGTATTTATTTGACATGCATAACAAAGTTTCAATGAGGTCAATCCTTACATTAGGTCCTAGTCTTGGGATTGTTAGGGTTCCTGGATTGGGCCTTATCTACACTGAACTGGCTACTGGAGTCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTACCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTACCTGTGCCTTGTGTGCCACATGAGGAACGTTACCTCATTGGCCGAATTGGTCCCAAATCTTACCGATTGTATCGGTGCATTGTTCGAAATGGCTATAAAGATGTGTATAGTCATCAAAATGATTTTGAAAATGACCTGGTGATGAGCATAGCAGAATTCATTCAATTGGAAGCAGAAGGTTGCTCTGGAAATGCAGAGGATGGACGGATGGCAGTGGTTAGGACGTCGGGGAAGTTTGGGACAAGATTGCTAATGTCAGAATCTGCTGGTTTTGAAGAAGGCAGCAGTATTAGTCTTCCTGGAGCTTTGACTGTTACTAGCAGTAAATCTCCAACACTGAAGAAGCTGCAGGCCATGTATGAGCAGGAATCGCCTGAACTCAACACTAGACGAAGGACTCGATTTGAGTTGCTAAATGTAATATATAAAGATCCACGTGTCAAGGAAGAGCTCATGGAACTTGTAGAAGCCAAGCGTGCTGGAGCAGCATATGTAATAGGTCATTCTCACGTAAAGGCCAAGTGGAACTCATCATTTCTAAAGAGGTTTGCTATCAACCTCTACTCTTTTCTCCGAAAAAATTGCCGGTCCCCTGCAGTAGGACTAAACATTCCGCAGATTTGTCTGATTAAGGTAGGAATGAATTACCATGTGTAG 2364 0.4044 MSSDASRERGASTVVERKFQSRTLLFLAYQSLGYLFGDLTLSPLYVYQSIFSGRLKKVQNEDAIFGAFSLIFWALSIISLLKYAIIMLSADDNGEGGIIALYSQLCRNAKFCLLPNHQASDEELSTYHKPGSSNRNIPPSPLKRFIEKHKSTKTVLLIFILLGACMVICVGALMPAISVRSSVEGLKIEAKIKNKSMVSLISCVLLIGLFVMQHRGSYKVAFVFPPIIILWLLTIFMIGIYNVIKWNPRVYQALSPYYIYKFFRLTGKDGWTNLGGVFLCVTGTEAMFADLGYYRQTPLRVAFCCVIYPCLVLQYMGQAAFLSKNLSAVPISFYASIPDILFWPVFVVAALAVIVASQAVIASTFTIVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIISLAVTVSLGDMSNIGYAYGMAYLIVVFVTTCLTSLVINLVWNQSLIVALAFALFFGSIEILFLSSYCMKILKGGWIPLVLSAVFMVVMYVWHYGSRKKYLFDMHNKVSMRSILTLGPSLGIVRVPGLGLIYTELATGVPASFTHFLTNLPAFYQVVVFVCVKTVPVPCVPHEERYLIGRIGPKSYRLYRCIVRNGYKDVYSHQNDFENDLVMSIAEFIQLEAEGCSGNAEDGRMAVVRTSGKFGTRLLMSESAGFEEGSSISLPGALTVTSSKSPTLKKLQAMYEQESPELNTRRRTRFELLNVIYKDPRVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFLKRFAINLYSFLRKNCRSPAVGLNIPQICLIKVGMNYHV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00448 787 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo6g00448 787 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
Pumo6g00448 787 NCBIfam potassium uptake protein 27 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00448 Pumo-Chr6 5573255 5580591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00448 14 787 Inorganic Solute Cotransporters AT4G23640 61.617 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00448 K03549 - gmx:100819743 1480.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00448 6 5573255 5580591 Pumo6g00448 6 5573255 5580591 ECH