Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00438 ATGAACGACGCAGATGTCTCTAAGCAAATCCAGCAGATGGTGCGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTGCAGTTGGTCGAAGCCGAAAAGAAGAAGATCAGGCAAGAGTACGAACGCAAAGAGCGCCAAGTCGAAATTCGCAAGAAGATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTATTGAATGTGAGTCATCATCATCATTTGACTGTGGCTCATCATGATCATGTGTACAGACACCTTCTGAAAGATCTCATTGTTCAGTGTTTGCTTAGACTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAAGATGACCTGCACTTGGTAGAGCATGTGCTGGATTCAGCTGCACAGGAGTATGCTGAAAAAGCAAATGTTGACCCCCCAGAGATCATTGTTGACAACCAAGTCTATCTTCCACCTGGACCCAGTCATCACAATTCTCATGATCCCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGGCTTGATGTAGTGTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCAGCTCTTTGGACAAGTTGTTGCTTGA 717 0.4575 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKELLNVSHHHHLTVAHHDHVYRHLLKDLIVQCLLRLKEPSVLLRCRKDDLHLVEHVLDSAAQEYAEKANVDPPEIIVDNQVYLPPGPSHHNSHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00438 238 SUPERFAMILY V-type ATPase subunit E-like 87 234 - -
Pumo6g00438 238 Hamap V-type proton ATPase subunit E [atpE]. 8 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pumo6g00438 238 Gene3D - 1 62 - -
Pumo6g00438 238 Pfam ATP synthase (E/31 kDa) subunit 16 233 IPR002842 GO:0033178|GO:0046961|GO:1902600
Pumo6g00438 238 Coils Coil 38 61 - -
Pumo6g00438 238 Gene3D - 92 236 IPR038495 -
Pumo6g00438 238 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00438 Pumo-Chr6 5474657 5477751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00438 1 238 Primary Pumps ATPases(2) AT4G11150 73.529 8.97e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00438 K02150 - gmx:106794127 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00438 6 5474657 5477751 Pumo6g00438 6 5474657 5477751 ECH