Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00433 ATGGCCGTGAAAATGCACCTTAGTTTCTTCATCTTTGCCACGATTGGCTGCATGCTATTGGTATCTGTGAGTTCGACAACTCATGTTGTGGGAGACAAATTGGGTTGGAATTTGCCCAGTTACCCAGGGTTCTACGATGACTGGGCCAAGAAAAAAACCTTCGCTGTTGGTGACGAGCTTCTTTTCCAGTACCACCCAGGACTGAACACGGTGGTTCAGGTAGACAAGAACGACTACGATCATTGCACTACCAGAAATACCCTCCGCACGTACTTCAGAGGGAACTCCTCTGCTCCTTTGGAGAAGCCTGGGGACTATTTTTTCTTCTCTTCCGTTGGCAAGCATTGCGAGTTTGGCCAAAAGCTTCATGTTACTGTTGCTCAGGGAAGCAAATCCTTTCATTAA 405 0.4716 MAVKMHLSFFIFATIGCMLLVSVSSTTHVVGDKLGWNLPSYPGFYDDWAKKKTFAVGDELLFQYHPGLNTVVQVDKNDYDHCTTRNTLRTYFRGNSSAPLEKPGDYFFFSSVGKHCEFGQKLHVTVAQGSKSFH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00433 134 FunFam Cupredoxin superfamily protein 25 132 - -
Pumo6g00433 134 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Pumo6g00433 134 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Pumo6g00433 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pumo6g00433 134 SUPERFAMILY Cupredoxins 23 126 IPR008972 -
Pumo6g00433 134 Gene3D - 26 133 IPR008972 -
Pumo6g00433 134 PANTHER BLUE COPPER PROTEIN 26 127 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00433 Pumo-Chr6 5429663 5430230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00433 11 126 Phytocyanin Superfamily AT4G31840 35.593 3.44e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00433 - - gmx:102660389 245.358