Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00420 ATGGAGAGTGAGTCCTGGAGCTGGGAGCAGAACACACTCATCAATGAGCTAGTTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGCAGATTTGAGGATGCCGTATTCAGTTGACACAAGAGATTTTCTTGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTTATGATTCTAAGATGCAATGCATCAACTTCCGAGTTGCAGGCCATGAGTCAAGCAACAGCAACTTTGCTACCCGAGTCCCCAATATCTGTCCATGGAAGTCCTCTGCGCGAGGACGTTGATGGGGCCATCAAGGATCACCAGGAAGTTAAACATGATTCAAAGAAAAGAAAGATAACACCCAAATGGATGGATCATGTAAGAGTGAGCTGTGAGAGTGGTCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATATTTGACATAACTTACAGAGGAAAGCATACCTGTTCTCAGGGAAACAATGCCGTTCTGCCACCTAAGTCACCAGACAAACAAGAGAAACCAACACACAGTCATAACATTGATATTCACCATGCACAGGCATCACAAGAAAGCCTTACAAAGTTCAGAAACATCTTGTCTGTCAACACAGATAAACTGGACAATGGAGATATGGCATATCCTTTCACTTTCCCTTCAACTTCATTTGGATGCATGAAACAAGACAACCACAGCTTGATTCCTTTGGCTCTAGAGAATGAGTTCTTCTTGAGCAACCTATACCAAACACACCTCTTATCTCCAACAACACCAGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGATCTACAACAAGCCACATTCAGAATCTGATATCAATGAGATCATTTCCACCAACACATCTGCAACCAATTCTCCAATTCCTGATTTCAACTTCTCACTTGATCCAGTGGAAATTGACCCAAATTTCCCTTTCAATACCCCAGGATTTTTCTCCTGA 1092 0.4295 MESESWSWEQNTLINELVQGMEVARKLKADLRMPYSVDTRDFLVQRILSSYEKALMILRCNASTSELQAMSQATATLLPESPISVHGSPLREDVDGAIKDHQEVKHDSKKRKITPKWMDHVRVSCESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAVLPPKSPDKQEKPTHSHNIDIHHAQASQESLTKFRNILSVNTDKLDNGDMAYPFTFPSTSFGCMKQDNHSLIPLALENEFFLSNLYQTHLLSPTTPESNYFPSPTFQMNEFDGIYNKPHSESDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00420 363 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00420 363 MobiDBLite consensus disorder prediction 194 214 - -
Pumo6g00420 363 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00420 363 FunFam WRKY transcription factor 53 119 196 - -
Pumo6g00420 363 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00420 363 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo6g00420 363 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo6g00420 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 260 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00420 Pumo-Chr6 5311124 5314286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00420 7 258 WRKY Transcription Factor Family AT4G23810 45.091 4.28e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo6g00420 WRKY 8.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00420 - - gmx:100815760 697.582