Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00369 ATGGCCGAGGACTTTGCATTCCTCACATGGCTCTCACTAACACTACTCACTGTAACAGCATCAGCATCGGCATCGGCATCAGCAACGCACTGTGGCATGGCCGTCACGCCCTCAACCCCTCTTCTCTCCTTCCTCGAACGCCTCCAGGAAACAGCGTCCAAAACCTTCGGCGATTCCAACTTCGATCCAAAGACCTACGTCGACTTGCCTCTCAAGTTCACCCTCTCGGTTACCGAGGACGCCTTCCACAAGCTTCCGAGAATCGGCAACGGCTCCGTGCCGGTTGAGGACTTAAAGCGTTTCATAGAAGCCTACTTTGAAGGTGCAGGGGATGATCTGGTGCACCTGGACCCACAGGATTTCGTTCCCGAGCCCGAGGGTTTCTTGCCCAAGGTAAAGCACCCTCAGGTGAGGGCCTGGGCCTTGCAGGTCCATTCCCTTTGGAAAAACTTGAGCCGGAAAATATCCGCTGCGGTGAAGGCACAGCCAGACTTGCATACTATGCTCCCTCTCCCTGGTTCGGTTGTCATTCCCGGGTCGCGTTTTCGCGAGGTTTATTACTGGGATTCCTATTGGGTTATTAGGGGCCTGCTCGCGAGTAAAATGCATGACACTGCTAAGTCGATTGTGACCAATCTCATTTCCTTGATAGAACAATACGGGTTTGTTCTTAATGGTGCTAGAGCATACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACAGTAGCACGGGTGATGTGGAATTAGTTAAAAGATCTCTACCTGCCCTATTGAAAGAATATGAATTTTGGAATTCAGATATACATAAAGTGACCATCTTGGATGCTCAAGGTTGCACTCACACCTTAAATCGTTATTATGCAAAGTGGGACAAACCCAGGCCAGAATCGTCCATAATGGACAAGACATCTGCTTCCAACTTCTCGAGTATTTCAGAAAAACAACAGTTTTACCGTGAACTGGCATCAGCTGCTGAATCGGGATGGGATTTCAGCACCAGATGGATGAGAAACCCGCCTAATTTCACAACATTGGCTACAACATCTGTAATACCTGTTGATTTGAATGCATTTCTACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTACTGGAGATAATAGCACTGCTGAACGGTTCCTGGAAATTTCTGATCTTAGAAAGAAGGCAATGAACTCTGTTTTCTGGAATGCAAACAAGAAACAATGGCTTGATTACTGGCTCAGCAGTACATGTGAGGAGGTCCATGTTTGGAAAAACGAGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCGTTTTACTCAGATACTTCACTTGTGGGTAGTGTTGTTGAAAGTCTCAAAACTTCTGGCCTGCTCCGTGCTGCTGGAGTTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGGTGGGCACCGCTTCAACACATGCTAGTGGAAGGCCTGCTAAAATCAGGGTTGAAAGAAGCAAGGCCATTGGCTGAGGAAATTGCCATCAGATGGATCACAACCAATTATGTTGTTTACAAGAAAACGGGTGTAATGCATGAAAAGTTTGACGTTGAGCGTTGTGGAGAATTTGGAGGTGGGGGCGAATATGTACCCCAGACTGGTTTTGGCTGGTCAAATGGAGTTGTGTTGGCATTCTTGGAGGAATTTGGATGGCCTGAAGATCGGAACATAGAATGTTGA 1752 0.4675 MAEDFAFLTWLSLTLLTVTASASASASATHCGMAVTPSTPLLSFLERLQETASKTFGDSNFDPKTYVDLPLKFTLSVTEDAFHKLPRIGNGSVPVEDLKRFIEAYFEGAGDDLVHLDPQDFVPEPEGFLPKVKHPQVRAWALQVHSLWKNLSRKISAAVKAQPDLHTMLPLPGSVVIPGSRFREVYYWDSYWVIRGLLASKMHDTAKSIVTNLISLIEQYGFVLNGARAYYTNRSQPPLLSAMIYEIYSSTGDVELVKRSLPALLKEYEFWNSDIHKVTILDAQGCTHTLNRYYAKWDKPRPESSIMDKTSASNFSSISEKQQFYRELASAAESGWDFSTRWMRNPPNFTTLATTSVIPVDLNAFLLGMELNIAFFAKVTGDNSTAERFLEISDLRKKAMNSVFWNANKKQWLDYWLSSTCEEVHVWKNEHQNQNVFASNFVPLWMKPFYSDTSLVGSVVESLKTSGLLRAAGVATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLKEARPLAEEIAIRWITTNYVVYKKTGVMHEKFDVERCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 220 238 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 400 416 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 477 493 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 357 374 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 290 307 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 325 342 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PRINTS Glycosyl hydrolase family 37 signature 557 570 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 PANTHER TREHALASE 25 581 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 ProSitePatterns Trehalase signature 2. 484 493 IPR018232 GO:0004555|GO:0005991
Pumo6g00369 583 Gene3D - 45 581 IPR012341 GO:0005975
Pumo6g00369 583 Pfam Trehalase 60 574 IPR001661 GO:0004555|GO:0005991
Pumo6g00369 583 SUPERFAMILY Six-hairpin glycosidases 56 576 IPR008928 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00369 19 583 Trehalose Biosynthesis Gene Families AT4G24040 59.930 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00369 K01194 - gmx:547539 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00369 6 4799511 4804573 Pumo6g00369 6 4799511 4804573 ECH