Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00359 ATGACACTGCTAGTGCTGCATTGCACTTTCATTGTCAAATACCTTGCTGAACTCCCTCACATTTATGATAGAGTTTATCAAGAGCAAATGGAAATTGCAAAATCGAAATCGCCAGGAGAGTTATTGAATTGGGATGATATCAACAGGATGAAGTATTCTTGGAGTGTAGCTTGTGAAGTAATGAGAATCGCTCCTCCACTTCAAGGAGGTTTTAGGGAAGCTATCAATGACTTTATTTTTAATGGGTTCTCAATTCCAAAGGGATGGAAGTTGTATTGGAGTGCAAATTCAACACATAAAAATCCAGAATACTTTCCAGAGCCAGAGAAATTCGATCCAAGTAGATTCGAAGGAAAAGGGCCAGCTCCTTATACTTTTGTACCATTTGGTGGAGGACCAAGGACGTGCCCCGGAAAAGAGTATGCTCGATTGGAAATATTGGTTTTCATGCACAACCTAGTCAAGAGGTTCAAATGGGAAAAATTGATTCCAGATGAGAAGATCATCGTTGATCCCTTGCCCATACCTGCAAACAACCTCCCAATTCGTCTTCATCCTCACAAACCCTAA 570 0.407 MTLLVLHCTFIVKYLAELPHIYDRVYQEQMEIAKSKSPGELLNWDDINRMKYSWSVACEVMRIAPPLQGGFREAINDFIFNGFSIPKGWKLYWSANSTHKNPEYFPEPEKFDPSRFEGKGPAPYTFVPFGGGPRTCPGKEYARLEILVFMHNLVKRFKWEKLIPDEKIIVDPLPIPANNLPIRLHPHKP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00359 189 PANTHER CYTOCHROME P450 26 8 172 - -
Pumo6g00359 189 SUPERFAMILY Cytochrome P450 8 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS E-class P450 group I signature 126 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS E-class P450 group I signature 94 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS E-class P450 group I signature 136 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS E-class P450 group I signature 8 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS P450 superfamily signature 55 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS P450 superfamily signature 17 30 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 PRINTS P450 superfamily signature 127 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 Pfam Cytochrome P450 10 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g00359 189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 129 138 IPR017972 GO:0005506|GO:0016705
Pumo6g00359 189 Gene3D Cytochrome P450 5 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00359 Pumo-Chr6 4708416 4710525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00359 9 165 Cytochrome P450 AT5G45340 44.586 2.38e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00359 K20667 - gmx:100801007 379.407